RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ANAPC7Q9UJX3 599 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 NOVA2Q9UNW9 492 aaKnown RBP20.29■□□□□ 0.84
MBD3-201ENST00000156825 SSTR3P32745 418 aaPredicted RBP20.29■□□□□ 0.84
MBD3-201ENST00000156825 XXYLT1Q8NBI6 393 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 CHD1O14646 1710 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 MED7O43513 233 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 GPC4O75487 556 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 TMEM270Q6UE05 265 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 GDAP1Q8TB36 358 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 GLI2P10070 1586 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 LRRC7Q96NW7 1537 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 IPO5O00410 1097 aaKnown RBP20.29■□□□□ 0.84
MBD3-201ENST00000156825 PRPSAP1Q14558 356 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 ZNF667Q5HYK9 610 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 TAF6LQ9Y6J9 622 aa20.29■□□□□ 0.84
MBD3-201ENST00000156825 TRIM49P0CI25 452 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 TRIM49CP0CI26 452 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 DR1Q01658 176 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ALX1Q15699 326 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ADAM22Q9P0K1 906 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ZBTB12Q9Y330 459 aaPredicted RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 MSH2P43246 934 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 BCORL1Q5H9F3 1711 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 HOXC10Q9NYD6 342 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 RGL1Q9NZL6 768 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 A0A0G2JLW4 131 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ESYT2A0FGR8 921 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 SEPT6Q14141 434 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 PPP4R3CPQ6ZMV5 832 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 KIF9Q9HAQ2 790 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ADCY10Q96PN6 1610 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ZNF579Q8NAF0 562 aaKnown RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 CFAP36Q96G28 342 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ATP6V0A4Q9HBG4 840 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 RNF181Q9P0P0 153 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 CNOT8Q9UFF9 292 aaKnown RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 NAA30Q147X3 362 aaPredicted RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 MAPK6Q16659 721 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 FBXO38Q6PIJ6 1188 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 NSUN6Q8TEA1 469 aaKnown RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 C11orf70Q9BRQ4 267 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.28■□□□□ 0.84
MBD3-201ENST00000156825 SNX24Q9Y343 169 aa20.28■□□□□ 0.84
MBD3-201ENST00000156825 ZBTB24O43167 697 aaPredicted RBP20.27■□□□□ 0.84
MBD3-201ENST00000156825 PSMA2P25787 234 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 GARSP41250 739 aaKnown RBP20.27■□□□□ 0.84
MBD3-201ENST00000156825 IL9RQ01113 521 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 ZNF211Q13398 564 aaPredicted RBP20.27■□□□□ 0.84
MBD3-201ENST00000156825 NNTQ13423 1086 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 RHPN2Q8IUC4 686 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 PBKQ96KB5 322 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 EPC1Q9H2F5 836 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 SLC12A1Q13621 1099 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 NEDD1Q8NHV4 660 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 FMO2Q99518 471 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 FEM1BQ9UK73 627 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 JAK3P52333 1124 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 RABL6Q3YEC7 729 aaPredicted RBP20.27■□□□□ 0.84
MBD3-201ENST00000156825 ZNF568Q3ZCX4 644 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 C12orf60Q5U649 245 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 LXNQ9BS40 222 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 ABCF3Q9NUQ8 709 aa20.27■□□□□ 0.84
MBD3-201ENST00000156825 USP27XA6NNY8 438 aa20.27■□□□□ 0.83
MBD3-201ENST00000156825 NCK2O43639 380 aa20.27■□□□□ 0.83
MBD3-201ENST00000156825 ASPHQ12797 758 aa20.27■□□□□ 0.83
MBD3-201ENST00000156825 TRIM28Q13263 835 aaKnown RBP20.27■□□□□ 0.83
MBD3-201ENST00000156825 MUM1Q2TAK8 710 aa20.27■□□□□ 0.83
MBD3-201ENST00000156825 JADE1Q6IE81 842 aa20.27■□□□□ 0.83
MBD3-201ENST00000156825 GSPT2Q8IYD1 628 aaKnown RBP20.27■□□□□ 0.83
MBD3-201ENST00000156825 ADRA2BP18089 450 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 HMGCS2P54868 508 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 PRAMEF18Q5VWM3 479 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 THOC1Q96FV9 657 aaKnown RBP20.26■□□□□ 0.83
MBD3-201ENST00000156825 KIF2CQ99661 725 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 CPSF3Q9UKF6 684 aaKnown RBP20.26■□□□□ 0.83
MBD3-201ENST00000156825 PACSIN2Q9UNF0 486 aaPredicted RBP20.26■□□□□ 0.83
MBD3-201ENST00000156825 CASP8Q14790 479 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 MMEL1Q495T6 779 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 TBC1D16Q8TBP0 767 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 VCXQ9H320 206 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 TTC26A0AVF1 554 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 HIP1RO75146 1068 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 LMBRD2Q68DH5 695 aaPredicted RBP20.26■□□□□ 0.83
MBD3-201ENST00000156825 SGMS1Q86VZ5 419 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 SENP2Q9HC62 589 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 EXOC1LA0A1B0GW35 172 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 CCDC151A5D8V7 595 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 XPAP23025 273 aaPredicted RBP20.26■□□□□ 0.83
MBD3-201ENST00000156825 SLFN12LQ6IEE8 588 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 PCGF5Q86SE9 256 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 GINM1Q9NU53 330 aa20.26■□□□□ 0.83
MBD3-201ENST00000156825 NPHP3-ACAD11A0A0J9YXS1 232 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 F5H423 210 aaPredicted RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 RWDD2BP57060 319 aa20.25■□□□□ 0.83
MBD3-201ENST00000156825 PRPF38AQ8NAV1 312 aaKnown RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 QARSP47897 775 aaKnown RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 SMAD1Q15797 465 aaKnown RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 KNOP1Q1ED39 458 aaKnown RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 TWF2Q6IBS0 349 aaKnown RBP20.25■□□□□ 0.83
MBD3-201ENST00000156825 RWDD4Q6NW29 188 aaKnown RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms