RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 PCDHA10Q9Y5I2 948 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 SCN4AP35499 1836 aa15.77■□□□□ 0.12
RTFDC1-201ENST00000023939 IQCA1LA6NCM1 817 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 UNCXA6NJT0 531 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 TGFB1I1O43294 461 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 CTIFO43310 598 aaKnown RBP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 DKC1O60832 514 aaKnown RBP eCLIP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 HIP1RO75146 1068 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 NR3C1P04150 777 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 YWHABP31946 246 aaKnown RBP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 KLK7P49862 253 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 SYT10Q6XYQ8 523 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 FAM178BQ8IXR5 827 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 ZNF592Q92610 1267 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 OTUD5Q96G74 571 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 CLMNQ96JQ2 1002 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 PCMTD1Q96MG8 357 aaPredicted RBP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 DESI2Q9BSY9 194 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 TAF1DQ9H5J8 278 aaPredicted RBP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 BCAS3Q9H6U6 928 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 L2HGDHQ9H9P8 463 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 AGPAT5Q9NUQ2 364 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 ZNHIT6Q9NWK9 470 aaKnown RBP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 AGTPBP1Q9UPW5 1226 aa15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.77■□□□□ 0.11
RTFDC1-201ENST00000023939 ZMYM2Q9UBW7 1377 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 SFI1A8K8P3 1242 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 EIF3JO75822 258 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 NMT1P30419 496 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 COPB2P35606 906 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 MYBPC2Q14324 1141 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 ODR4Q5SWX8 454 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 LDLRAD1Q5T700 205 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 GADL1Q6ZQY3 521 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 ARMC9Q7Z3E5 817 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 CCDC170Q8IYT3 715 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 GOLGA5Q8TBA6 731 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 MKNK1Q9BUB5 465 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 SPATC1LQ9H0A9 340 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 ST6GALNAC4Q9H4F1 302 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 LARSQ9P2J5 1176 aaKnown RBP15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 PLAGL2Q9UPG8 496 aa15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 EPN1Q9Y6I3 576 aaPredicted RBP15.76■□□□□ 0.11
RTFDC1-201ENST00000023939 LCTP09848 1927 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 IRX3P78415 501 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 MOGSQ13724 837 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 STXBP2Q15833 593 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 UGCGQ16739 394 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 ZNF662Q6ZS27 426 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 FASTKD5Q7L8L6 764 aaKnown RBP15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 PNMA8AQ86V59 439 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 SLC17A8Q8NDX2 589 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 CHP1Q99653 195 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 ASCC2Q9H1I8 757 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 DMAC2Q9NW81 257 aa15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 ARMCX3Q9UH62 379 aaPredicted RBP15.75■□□□□ 0.11
RTFDC1-201ENST00000023939 NDUFA10O95299 355 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 SLC25A27O95847 323 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 PLS3P13797 630 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 EDNRBP24530 442 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 HERVK_113P62684 666 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 SLC9A9Q8IVB4 645 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 ANKRD35Q8N283 1001 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 ATP6V0A1Q93050 837 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 BORCS6Q96GS4 357 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 DRC1Q96MC2 740 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 NUCKS1Q9H1E3 243 aaKnown RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 MMRN2Q9H8L6 949 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 GRIN3BO60391 1043 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 CNMDO75829 334 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 AKAP3O75969 853 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 STBD1O95210 358 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 PSAPP07602 524 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 EPB41P11171 864 aaKnown RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 KCNA1Q09470 495 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 ZC2HC1CQ53FD0 456 aaPredicted RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 MOB2Q70IA6 237 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 HS2ST1Q7LGA3 356 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 NEK11Q8NG66 645 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 BAP1Q92560 729 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 SYN2Q92777 582 aaPredicted RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 POLD4Q9HCU8 107 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 CEP72Q9P209 647 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 CGNQ9P2M7 1197 aaKnown RBP15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 SLC9A2Q9UBY0 812 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 DNAI1Q9UI46 699 aa15.74■□□□□ 0.11
RTFDC1-201ENST00000023939 EPHB6O15197 1021 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 ALDH5A1P51649 535 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 KCNH2Q12809 1159 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 TTLL12Q14166 644 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 ABHD15Q6UXT9 468 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 OTUD6AQ7L8S5 288 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 FAM133AQ8N9E0 248 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 GBP3Q9H0R5 595 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 TMEM206Q9H813 350 aa15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 FAM207AQ9NSI2 230 aaPredicted RBP15.73■□□□□ 0.11
RTFDC1-201ENST00000023939 EIF3CLB5ME19 914 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms