RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 IPO11Q9UI26 975 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 GOLGA8CPA6NN73 597 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 POLRMTO00411 1230 aaKnown RBP11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 GFPT2O94808 682 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 PHBP35232 272 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 SETDB1Q15047 1291 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 SLC8A2Q9UPR5 921 aa11.21□□□□□ -0.62
NIPAL3-201ENST00000003912 DYNC1LI2O43237 492 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 NR3C2P08235 984 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 C6orf222P0C671 652 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 ERO1BQ86YB8 467 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 CHAMP1Q96JM3 812 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 KRT12Q99456 494 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 TIPINQ9BVW5 301 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SPDYE2BA6NHP3 402 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SPDYE6P0CI01 402 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 PDHBP11177 359 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 RASSF7Q02833 373 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 C10orf76Q5T2E6 689 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SEPT1Q8WYJ6 367 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 MAP3K14Q99558 947 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 PRDM5Q9NQX1 630 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 ZNF148Q9UQR1 794 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 POTEFA5A3E0 1075 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 POTEIP0CG38 1075 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SRGAP2BP0DMP2 458 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SMARCA1P28370 1054 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 MAN1A1P33908 653 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 PSMC4P43686 418 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 KAZNQ674X7 775 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 XRRA1Q6P2D8 792 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 POTEGQ6S5H5 508 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 POTEEQ6S8J3 1075 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 ATP2C2O75185 946 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 NR3C1P04150 777 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 KLRK1P26718 216 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 ARL13BQ3SXY8 428 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 XKR3Q5GH77 459 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 FYB2Q5VWT5 728 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 CCDC110Q8TBZ0 833 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 PRMT6Q96LA8 375 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 SLITRK6Q9H5Y7 841 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 GBA2Q9HCG7 927 aaPredicted RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 PLCB1Q9NQ66 1216 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 TYW1Q9NV66 732 aaKnown RBP11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 GDAQ9Y2T3 454 aa11.2□□□□□ -0.62
NIPAL3-201ENST00000003912 UBE2Q2LH0YL09 131 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 RARBP10826 455 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 KRT15P19012 456 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CDC25BP30305 580 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 COASYQ13057 564 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 PPFIA1Q13136 1202 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 ZNF699Q32M78 642 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 STOX1Q6ZVD7 989 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CTAGE3PQ8IX95 158 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 TTC39CQ8N584 583 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 FAM133AQ8N9E0 248 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CCDC68Q9H2F9 335 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 MAFGO15525 162 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 GMNNO75496 209 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CAP2P40123 477 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 ZBED6P86452 979 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CXCL9Q07325 125 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 PDIA5Q14554 519 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 PLCB4Q15147 1175 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CYFIP1Q7L576 1253 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 IGDCC4Q8TDY8 1250 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 FAM213AQ9BRX8 229 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 TBX3O15119 743 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 SEMA3FQ13275 785 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 ERCC6LQ2NKX8 1250 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 DNAJC21Q5F1R6 531 aaKnown RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 RYBPQ8N488 228 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 YWHABP31946 246 aaKnown RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 DENND2CQ68D51 928 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 C11orf57Q6ZUT1 292 aaPredicted RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 VPS18Q9P253 973 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 POLIQ9UNA4 740 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 PRPSAP2O60256 369 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 EYA4O95677 639 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 SERPING1P05155 500 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 CCDC6Q16204 474 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 KNOP1Q1ED39 458 aaKnown RBP11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 LRRC8AQ8IWT6 810 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 SCFD2Q8WU76 684 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 ANAPC4Q9UJX5 808 aa11.19□□□□□ -0.62
NIPAL3-201ENST00000003912 RICTORQ6R327 1708 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 KCNJ6P48051 423 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 RBL2Q08999 1139 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 TCP11X2Q5H9J9 407 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 HHATQ5VTY9 493 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 NBPF11Q86T75 865 aa11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 LBHD1Q9BQE6 289 aaPredicted RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 SAMSN1Q9NSI8 373 aaKnown RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 SCAF8Q9UPN6 1271 aaKnown RBP11.18□□□□□ -0.62
NIPAL3-201ENST00000003912 KIF1AQ12756 1690 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms