RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Xxylt1Q3U4G3 392 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cln3Q61124 438 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Slc9a1Q61165 820 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ifit1Q64282 463 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nim1kQ8BHI9 436 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Robo4Q8C310 1012 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tmem63cQ8CBX0 802 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tmem60Q8K174 133 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Kbtbd4Q8R179 534 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Trim29Q8R2Q0 587 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Zcchc18Q8VD24 393 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tpgs1Q99MS8 303 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Zcchc8Q9CYA6 709 aaKnown RBP9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Msh5Q9QUM7 833 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Twf2Q9Z0P5 349 aaKnown RBP9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 SktA2AQ25 1946 aaKnown RBP9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ms4a4aA0A087WRT7 236 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Gm7356A0A087WSA6 508 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 AunipE9Q6Z5 340 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Pgk2P09041 417 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Muc1Q02496 630 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ppm1jQ149T7 507 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tpp2Q64514 1262 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Oscp1Q8BHW2 379 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 DpydQ8CHR6 1025 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Q8K2W9 541 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 SrrtQ99MR6 875 aaKnown RBP9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Rassf3Q99P51 232 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Adgrf4Q9D2L6 698 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tlr9Q9EQU3 1032 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Hic1Q9R1Y5 733 aa9.56□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nr1i3O35627 358 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Prom1O54990 867 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Pik3r1P26450 724 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cyp2c39P56656 490 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tff2Q03404 129 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 LbrQ3U9G9 626 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Igf2bp2Q5SF07 592 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Grik5Q61626 979 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nap1l3Q794H2 544 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Moxd2Q7TT41 619 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Erlin2Q8BFZ9 340 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ano1Q8BHY3 960 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cdkn2aipQ8BI72 563 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ticam2Q8BJQ4 232 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Wdr35Q8BND3 1181 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Osbpl2Q8BX94 484 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Trmt6Q8CE96 497 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 PdgfcQ8CI19 345 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ces1Q8VCC2 565 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cyp4a12aQ91WL5 508 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Lama2Q60675 3118 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Pde6bP23440 856 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Hnrnph2P70333 449 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Znhit6Q3UFB2 460 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 GcgrQ61606 485 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tbc1d30Q69ZT9 766 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cdc14aQ6GQT0 603 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Mcph1Q7TT79 822 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Atg4cQ811C2 458 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Prkag3Q8BGM7 489 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Apobec3Q99J72 440 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 NwcQ9CQI4 244 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Myo1hQ9D6A1 958 aa9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cse1lQ9ERK4 971 aaKnown RBP9.55□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cntnap5cQ0V8T7 1305 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Gm44511A0A0N4SW10 223 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ccng2O08918 344 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Klrb1bP27812 223 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ly6dP35459 127 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Taf1bP97358 586 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ddx4Q61496 702 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 BegainQ68EF6 600 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ccdc66Q6NS45 935 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cyp2c54Q6XVG2 490 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nrde2Q80XC6 1172 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tdp1Q8BJ37 609 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Kri1Q8VDQ9 704 aaKnown RBP9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Cyp2c50Q91X77 490 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Snx29Q9D3S3 818 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 MrgbpQ9DAT2 204 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 PfkpQ9WUA3 784 aaKnown RBP9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Mia3Q8BI84 1930 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ccdc88cQ6VGS5 2009 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Wnt7aP24383 349 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Irs1P35569 1233 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nucb2P81117 420 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Sox10Q04888 466 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Tex11Q14AT2 947 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Hsph1Q61699 858 aaKnown RBP9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ptpn14Q62130 1189 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Skiv2lQ6NZR5 1244 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ahcyl1Q80SW1 530 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Ccdc172Q810N9 267 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nol12Q8BG17 217 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Rusc1Q8BG26 893 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Washc5Q8C2E7 1159 aaKnown RBP9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Nup88Q8CEC0 753 aaKnown RBP9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Fgd4Q91ZT5 766 aa9.54□□□□□ -0.88
Trim42-201ENSMUST00000035026 Foxp3Q99JB6 429 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms