RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Dennd1aQ8K382 1016 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dr1Q91WV0 176 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Bzw1Q9CQC6 419 aaKnown RBP13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Mad2l2Q9D752 211 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Mtcl1Q3UHU5 1945 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm14525B1AZA0 212 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm2012B1B0R1 212 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm7347D3YYI9 267 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rap1gds1E9Q912 607 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lrrc10bG3XA50 292 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 ChkbO55229 394 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Stx8O88983 236 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gna11P21278 359 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tex35Q14BK3 207 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Esyt2Q3TZZ7 845 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Oca2Q62052 833 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm14819Q62478 212 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Kctd3Q8BFX3 815 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Acbd3Q8BMP6 525 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Abcf2Q99LE6 628 aaKnown RBP13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ranbp17Q99NF8 1088 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccdc89Q9DA73 370 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Slc12a4Q9JIS8 1085 aa13.11□□□□□ -0.31
Ufd1-201ENSMUST00000005394 A0A286YCQ6 122 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm7168A0AUV4 508 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 PtenO08586 403 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 CflarO35732 481 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pgrmc1O55022 195 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Atp6v0a2P15920 856 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Bmp2P21274 394 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Adad1Q5SUE7 619 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Csgalnact2Q8C1F4 542 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Znf428Q8C1M2 176 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Unc5bQ8K1S3 945 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tsnaxip1Q99P25 704 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Lpin2Q99PI5 893 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Golga1Q9CW79 758 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dgcr8Q9EQM6 773 aa13.1□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Arfgef1G3X9K3 1846 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Patl2A2ARM1 529 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Myo1eE9Q634 1107 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gdap1O88741 358 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ap1m1P35585 423 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Stmn4P63042 189 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Armc2Q3URY6 854 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gm5935Q497S0 212 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Serpinb1cQ5SV42 375 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Znf496Q5SXI5 585 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Naif1Q6PFD7 327 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Zbed4Q80WQ9 1168 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Psmd5Q8BJY1 504 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 VillQ91YD6 859 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Pdxdc1Q99K01 787 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Q99KU6 348 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Kif17Q99PW8 1038 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 AacsQ9D2R0 672 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Nsmce1Q9D720 266 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Orc3Q9JK30 715 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rabgef1Q9JM13 491 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ptf1aQ9QX98 324 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Myh10Q61879 1976 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Kcng1A2BDX4 514 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tcp10bE9PYJ0 438 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Zfp213E9QAW0 468 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ctnnal1O88327 731 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Oprl1P35377 367 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 AdkP55264 361 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Gas1Q01721 343 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 EnahQ03173 802 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ccdc84Q4VA36 332 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Fxr1Q61584 677 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Rbm15bQ6PHZ5 887 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Trpa1Q8BLA8 1125 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Efl1Q8C0D5 1127 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 NcaldQ91X97 193 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tbrg4Q91YM4 630 aaKnown RBP13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Ttc5Q99LG4 440 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dnajc19Q9CQV7 116 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Dph5Q9CWQ0 281 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Mageb16Q9CWV4 363 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 TbcbQ9D1E6 244 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Tex9Q9D845 387 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 EmcnQ9R0H2 261 aa13.09□□□□□ -0.31
Ufd1-201ENSMUST00000005394 Nup62clA2AG10 272 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ankrd63A2ARS0 390 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ccdc78D3Z5T1 437 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Maml3D4QGC2 1135 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 1700029H14RikE9PY36 240 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Aknad1E9Q8N6 675 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Akr1c19G3X9Y6 323 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Snx3O70492 162 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 CfhP06909 1234 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Serpinc1P32261 465 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Rhbdl3P58873 404 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Drp2Q05AA6 957 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 TraddQ3U0V2 310 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Ndufaf2Q59J78 168 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Tnni3kQ5GIG6 834 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 Cyb5d1Q5NCY3 228 aa13.08□□□□□ -0.32
Ufd1-201ENSMUST00000005394 CcnjlQ5SRT8 387 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms