RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 PaoxQ8C0L6 504 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 SmapQ9R0P4 181 aaKnown RBP17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 ArcQ9WV31 396 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 Sept3Q9Z1S5 350 aa17.91■□□□□ 0.46
Shh-201ENSMUST00000002708 1700017N19RikA0A087WPJ1 469 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Krt36B1AQ75 473 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 D1Pas1P16381 660 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Opa1P58281 960 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 MlxipQ2VPU4 917 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Nhej1Q3KNJ2 295 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Chtf18Q8BIW9 969 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Zc3h7bF8VPP8 982 aaKnown RBP17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Ccdc33Q3ULW6 985 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Wdr44Q6NVE8 915 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 AagabQ8R2R3 316 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Apbb1ipQ8R5A3 670 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Q91Z58 1206 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Ebag9Q9D0V7 213 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Pgrmc1O55022 195 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 E2f5Q61502 335 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 3830403N18RikQ9D6C3 208 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Klf15Q9EPW2 415 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Sh2b2Q9JID9 621 aa17.9■□□□□ 0.46
Shh-201ENSMUST00000002708 Sema4dO09126 861 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Mcl1P97287 331 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Siah1bQ06985 282 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Cypt2Q6P924 180 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Rassf10Q8BL43 508 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 CnstQ8CBC4 711 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Coa7Q921H9 231 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 ArpinQ9D0A3 226 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 A0A286YCQ6 122 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Usp17ldG5E8G2 545 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Usp17lcG5E8I7 545 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Nr1i3O35627 358 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Ctnna1P26231 906 aaKnown RBP17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Pkn1P70268 946 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Trim43cP86449 446 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Lig3P97386 1015 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 BC051142Q3V0M8 400 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Naa15Q80UM3 865 aaKnown RBP17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Micall1Q8BGT6 870 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 PolrmtQ8BKF1 1207 aaKnown RBP17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Sgms1Q8VCQ6 419 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Chn1Q91V57 459 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Trex1Q91XB0 314 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Entpd5Q9WUZ9 427 aa17.89■□□□□ 0.45
Shh-201ENSMUST00000002708 Slc27a3O88561 667 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tnnc1P19123 161 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tspyl3Q3UYP3 334 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tigd5Q499M4 642 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Scyl2Q8CFE4 930 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Pym1Q8CHP5 203 aaKnown RBP17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Rpap2Q8VC34 614 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 PpihQ9D868 188 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 MefvQ9JJ26 767 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 NynrinQ5DTZ0 1840 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Gm3095E9Q058 166 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Mucl2P02815 138 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tax1bp1Q3UKC1 814 aaKnown RBP17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tspyl5Q69ZB3 406 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 IgflQ6B9Z0 140 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Krt9Q6RHW0 743 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Pank4Q80YV4 820 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Enox2Q8R0Z2 598 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Gmcl1Q920G9 524 aa17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Cdc42ep4Q9JM96 349 aaKnown RBP17.88■□□□□ 0.45
Shh-201ENSMUST00000002708 Tnfrsf11aO35305 625 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 CraddO88843 199 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Gna14P30677 355 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Serpinc1P32261 465 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Usp4P35123 962 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Hspa9P38647 679 aaKnown RBP17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Zc3h18Q0P678 948 aaKnown RBP17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Znf367Q0VDT2 340 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 TraddQ3U0V2 310 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Cplx4Q80WM3 160 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Fam71aB7XG49 585 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Gsg1l2M0QWL6 290 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 TyrobpO54885 114 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Pja1O55176 578 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Klra9Q2TJJ8 266 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Slc30a9Q5IRJ6 567 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Rgl1Q60695 768 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Grik5Q61626 979 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Lilrb4Q64281 335 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 KaznQ69ZS8 779 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 CbsQ91WT9 561 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 SetQ9EQU5 289 aaKnown RBP17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Znf704Q9ERQ3 566 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Stat2Q9WVL2 923 aa17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Gys1Q9Z1E4 738 aaKnown RBP17.87■□□□□ 0.45
Shh-201ENSMUST00000002708 Nova2D3YVV7 556 aaKnown RBP17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Gm8298J3QPI0 401 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Ap1b1O35643 943 aaKnown RBP17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Npdc1Q64322 332 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Adgrg6Q6F3F9 1165 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 RalylQ8BTF8 293 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Als2cr12Q8BVM7 383 aa17.86■□□□□ 0.45
Shh-201ENSMUST00000002708 Acsl3Q9CZW4 720 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 130.5 ms