RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 IGSF9BQ9UPX0 1349 aa13.78□□□□□ -0.2
LINC00339-213ENST00000642137 POTEB3A0JP26 581 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 MOXD2PA6NHM9 499 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 HAS3O00219 553 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 ZNF862O60290 1169 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 HBP1O60381 514 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 CABYRO75952 493 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 ZNF202O95125 648 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 ASGR1P07306 291 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 SYKP43405 635 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 NDUFA8P51970 172 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 ZRSR1Q15695 479 aaKnown RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 UGCGQ16739 394 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 FRMPD3Q5JV73 1810 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 POTEBQ6S5H4 581 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 IQUBQ8NA54 791 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 U2AF1L4Q8WU68 220 aaKnown RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 BBXQ8WY36 941 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 KAT2BQ92831 832 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 FAM167AQ96KS9 214 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 MTG1Q9BT17 334 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 TMEM106CQ9BVX2 250 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 KATNAL1Q9BW62 490 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 NIFKQ9BYG3 293 aaKnown RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 GOLPH3LQ9H4A5 285 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 WRAP73Q9P2S5 460 aaPredicted RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 STK17AQ9UEE5 414 aa13.77□□□□□ -0.21
LINC00339-213ENST00000642137 DBR1Q9UK59 544 aaKnown RBP13.77□□□□□ -0.21
LINC00339-213ENST00000642137 A0A087X0B3 334 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 E9PMD0 336 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 EYA4O95677 639 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 F2P00734 622 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 TFRCP02786 760 aaKnown RBP13.76□□□□□ -0.21
LINC00339-213ENST00000642137 OATP04181 439 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PLCG1P19174 1290 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 YWHABP31946 246 aaKnown RBP13.76□□□□□ -0.21
LINC00339-213ENST00000642137 GJA8P48165 433 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PSEN2P49810 448 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PSMC6P62333 389 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 FAM160A1Q05DH4 1040 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 SNW1Q13573 536 aaKnown RBP13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PLCB4Q15147 1175 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 E2F4Q16254 413 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 FMR1NBQ8N0W7 255 aaPredicted RBP13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PDILTQ8N807 584 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 ATP8B4Q8TF62 1192 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 TIGD1Q96MW7 591 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PLIN2Q99541 437 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
LINC00339-213ENST00000642137 KAT6AQ92794 2004 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 LOXHD1Q8IVV2 1947 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 KBTBD13C9JR72 458 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 DNM1LO00429 736 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ZBTB39O15060 712 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ZNF286BP0CG31 522 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 LIG1P18858 919 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 STAT6P42226 847 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ACLYP53396 1101 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 PRKCEQ02156 737 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 MFSD10Q14728 455 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 NAALADL2Q58DX5 795 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ZNF484Q5JVG2 852 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ANO5Q75V66 913 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ELOA2Q8IYF1 753 aaPredicted RBP13.75□□□□□ -0.21
LINC00339-213ENST00000642137 SYT2Q8N9I0 419 aaPredicted RBP13.75□□□□□ -0.21
LINC00339-213ENST00000642137 ANKLE1Q8NAG6 615 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 PIGOQ8TEQ8 1089 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 RAD54LQ92698 747 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 MAGEF1Q9HAY2 307 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 PHF24Q9UPV7 400 aa13.75□□□□□ -0.21
LINC00339-213ENST00000642137 A0A087WWV3 80 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 NR1I2O75469 434 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 MBD3O95983 291 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
LINC00339-213ENST00000642137 SLFN14P0C7P3 912 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 PLA2G4BP0C869 781 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 MARK3P27448 753 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 RARRES1P49788 294 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 KIAA0753Q2KHM9 967 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 KANK3Q6NY19 840 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 CXCL17Q6UXB2 119 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 KRBA2Q6ZNG9 492 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 SV2BQ7L1I2 683 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 EXOC8Q8IYI6 725 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 LRRC15Q8TF66 581 aa13.74□□□□□ -0.21
LINC00339-213ENST00000642137 LARP4BQ92615 738 aaKnown RBP13.74□□□□□ -0.21
LINC00339-213ENST00000642137 DHX58Q96C10 678 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms