RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 BTAF1O14981 1849 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 GOLGA6L7A0A1B0GV03 622 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 SPTLC2O15270 562 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 EPB41P11171 864 aaKnown RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 ESRRAP11474 423 aaPredicted RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 CLNS1AP54105 237 aaKnown RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 RWDD2BP57060 319 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 NMIQ13287 307 aaPredicted RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 SCARA3Q6AZY7 606 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 RCSD1Q6JBY9 416 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 TOM1L2Q6ZVM7 507 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 NBPF5PQ86XG9 351 aaPredicted RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 NOA1Q8NC60 698 aaKnown RBP6.55□□□□□ -1.36
CASC19-260ENST00000641828 SIL1Q9H173 461 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 ATP6V0A4Q9HBG4 840 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 INTS13Q9NVM9 706 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 TSPYL4Q9UJ04 414 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 SLC6A14Q9UN76 642 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 TRIM33Q9UPN9 1127 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 LMO7Q8WWI1 1683 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 ANKARQ7Z5J8 1434 aa6.55□□□□□ -1.36
CASC19-260ENST00000641828 GPR25O00155 361 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 MPHOSPH10O00566 681 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 NBPF7P0C2Y1 421 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 AKAP17AQ02040 695 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 IFFO1Q0D2I5 559 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 COL9A3Q14050 684 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 NR1I3Q14994 352 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 MTERF2Q49AM1 385 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TTC19Q6DKK2 380 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 BRAPQ7Z569 592 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PDZD3Q86UT5 571 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 ELOA2Q8IYF1 753 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 SLC35F6Q8N357 371 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 CCDC26Q8TAB7 109 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TCP11Q8WWU5 503 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 RIN2Q8WYP3 895 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 CCDC51Q96ER9 411 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 FAM227BQ96M60 508 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 CDK19Q9BWU1 502 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 SMG9Q9H0W8 520 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 ACTR5Q9H9F9 607 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 RRAGCQ9HB90 399 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PCDH12Q9NPG4 1184 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 HOMER3Q9NSC5 361 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TMEM260Q9NX78 707 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 DDX20Q9UHI6 824 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 HOOK1Q9UJC3 728 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 NAGPAQ9UK23 515 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 KDM6AO15550 1401 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 CEMIPQ8WUJ3 1361 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PTPDC1A2A3K4 754 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 SRRM3A6NNA2 597 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 PES1O00541 588 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 ST8SIA5O15466 376 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 ATE1O95260 518 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 IPO7O95373 1038 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 GJB6O95452 261 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PFKFB1P16118 471 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 SYKP43405 635 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 CCNHP51946 323 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 LBX1P52954 281 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PCBP4P57723 403 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 AMPD2Q01433 879 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TRAF1Q13077 416 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 OS9Q13438 667 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 IKBKEQ14164 716 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 RBBP5Q15291 538 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 HSP90AB2PQ58FF8 381 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 TLDC1Q6P9B6 456 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 ELMSAN1Q6PJG2 1045 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 MPRIPQ6WCQ1 1025 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 CCNI2Q6ZMN8 369 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 SYNE3Q6ZMZ3 975 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TAX1BP1Q86VP1 789 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 PPFIBP1Q86W92 1011 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 CEP57Q86XR8 500 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 RUBCNQ92622 972 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TNFRSF25Q93038 417 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 RSRC1Q96IZ7 334 aaKnown RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 SELENOOQ9BVL4 669 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 TEX13AQ9BXU3 409 aaPredicted RBP6.54□□□□□ -1.36
CASC19-260ENST00000641828 AAASQ9NRG9 546 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 LRRC4BQ9NT99 713 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 DACH1Q9UI36 760 aa6.54□□□□□ -1.36
CASC19-260ENST00000641828 MED23Q9ULK4 1368 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 PIK3C2AO00443 1686 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 SALL1Q9NSC2 1324 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 COL5A2P05997 1499 aaPredicted RBP6.53□□□□□ -1.36
CASC19-260ENST00000641828 CICQ96RK0 1608 aaPredicted RBP6.53□□□□□ -1.36
CASC19-260ENST00000641828 TTC36A6NLP5 189 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 CTDNEP1O95476 244 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 ZNF18P17022 549 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 NAP1L1P55209 391 aaKnown RBP6.53□□□□□ -1.36
CASC19-260ENST00000641828 MTF1Q14872 753 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 ARSHQ5FYA8 562 aa6.53□□□□□ -1.36
CASC19-260ENST00000641828 EMC10Q5UCC4 262 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms