RNA–Protein interactions for RNA: ENST00000638084.1

LINC00598-215, long intergenic non-protein coding RNA 598, humanhuman

TSL 5 BASIC

Gene LINC00598, Length 1,974 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-215ENST00000638084 RASGEF1CQ8N431 466 aa8.09□□□□□ -1.11
LINC00598-215ENST00000638084 CNBD1Q8NA66 436 aa8.09□□□□□ -1.11
LINC00598-215ENST00000638084 PROCA1Q8NCQ7 364 aaPredicted RBP8.09□□□□□ -1.11
LINC00598-215ENST00000638084 ETNPPLQ8TBG4 499 aa8.09□□□□□ -1.11
LINC00598-215ENST00000638084 BORCS6Q96GS4 357 aa8.09□□□□□ -1.11
LINC00598-215ENST00000638084 CCNL1Q9UK58 526 aaPredicted RBP8.09□□□□□ -1.11
LINC00598-215ENST00000638084 BZW2Q9Y6E2 419 aaKnown RBP8.09□□□□□ -1.11
LINC00598-215ENST00000638084 HMGB1P1B2RPK0 211 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 PDXKO00764 312 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MEIS2O14770 477 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MEFVO15553 781 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SART1O43290 800 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 PPP1R37O75864 691 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 AKAP3O75969 853 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 AFPP02771 609 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ITGA4P13612 1032 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 GUCY2CP25092 1073 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 POLD1P28340 1107 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 INPP5BP32019 993 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SEC24CP53992 1094 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 POU5F1Q01860 360 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 PICALMQ13492 652 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 KNOP1Q1ED39 458 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 GPATCH4Q5T3I0 446 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ALKBH5Q6P6C2 394 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 C6orf89Q6UWU4 347 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 B4GALNT4Q76KP1 1039 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CERS5Q8N5B7 392 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SYT2Q8N9I0 419 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SLC30A5Q8TAD4 765 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 TBC1D22AQ8WUA7 517 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SEC14L1Q92503 715 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 LENG9Q96B70 501 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CALR3Q96L12 384 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CCT8L2Q96SF2 557 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 FBXL5Q9UKA1 691 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 FOCADQ5VW36 1801 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ATP8B3O60423 1300 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MYO3BQ8WXR4 1341 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ARFGEF1Q9Y6D6 1849 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 A0A0A6YYK5 440 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MYO1FO00160 1098 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 DDX3XO00571 662 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CEP104O60308 925 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MARCH6O60337 910 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 FSBPO95073 299 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 HNRNPH1P31943 449 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 RFC4P35249 363 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CASP4P49662 377 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ZNF844Q08AG5 666 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CUL1Q13616 776 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 KCTD19Q17RG1 926 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 BMT2Q1RMZ1 405 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 QRICH1Q2TAL8 776 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CEP85LQ5SZL2 805 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 FBXW10Q5XX13 1052 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MOXD1Q6UVY6 613 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 YTHDF3Q7Z739 585 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SFR1Q86XK3 245 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SIAH1Q8IUQ4 282 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 CNPY4Q8N129 248 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 OR2W6PQ8NHA6 318 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MYCBPAPQ8TBZ2 947 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 IPO4Q8TEX9 1081 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ZNF473Q8WTR7 871 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 TAF4BQ92750 862 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SLC35C1Q96A29 364 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 NAP1L4Q99733 375 aaKnown RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 REEP2Q9BRK0 252 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SYT11Q9BT88 431 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 AP1M1Q9BXS5 423 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ANO3Q9BYT9 981 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 LRRC4CQ9HCJ2 640 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 ARMCX3Q9UH62 379 aaPredicted RBP8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SLC12A6Q9UHW9 1150 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 SERPINB13Q9UIV8 391 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 GGA2Q9UJY4 613 aa8.08□□□□□ -1.12
LINC00598-215ENST00000638084 MEIS1O00470 390 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 BBOX1O75936 387 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 ANXA13P27216 316 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 RPA1P27694 616 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 HOXA10P31260 410 aaPredicted RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 GTF2IP78347 998 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 KCNA1Q09470 495 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 SWT1Q5T5J6 900 aaKnown RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 GJB7Q6PEY0 223 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 NT5DC3Q86UY8 548 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 NLRP14Q86W24 1093 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 SPATS2Q86XZ4 545 aaKnown RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 PRPF38AQ8NAV1 312 aaKnown RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 RPGRQ92834 1020 aaKnown RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 MKL1Q969V6 931 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 HES6Q96HZ4 224 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 DDX47Q9H0S4 455 aaKnown RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 DNAJC18Q9H819 358 aa8.07□□□□□ -1.12
LINC00598-215ENST00000638084 SUCLA2Q9P2R7 463 aaPredicted RBP8.07□□□□□ -1.12
LINC00598-215ENST00000638084 CNOT8Q9UFF9 292 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms