RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 TTC13Q8NBP0 860 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 TUBGCP2Q9BSJ2 902 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 SBNO1A3KN83 1393 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 KIF22Q14807 665 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 TTC23LQ6PF05 361 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 DEPDC7Q96QD5 511 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 RWDD3Q9Y3V2 267 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 APOA4P06727 396 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 DMRT2Q9Y5R5 561 aa20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 ADAT2Q7Z6V5 191 aaKnown RBP20.66■□□□□ 0.9
CACNA1A-257ENST00000638009 E5RI56 91 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ADAM9Q13443 819 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 CCDC127Q96BQ5 260 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ZNF653Q96CK0 615 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 FOPNLQ96NB1 174 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 MEIS3Q99687 375 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 PIGUQ9H490 435 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 SENP1Q9P0U3 644 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 CDC37Q16543 378 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 IKBIPQ70UQ0 350 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 SUPT20HQ8NEM7 779 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 QKIQ96PU8 341 aaKnown RBP eCLIP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ADNPQ9H2P0 1102 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 LRRC4Q9HBW1 653 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 POLR2FP61218 127 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 PPP4R3CPQ6ZMV5 832 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ARPP21Q9UBL0 812 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 B4E1Z4 1266 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 SLC27A2O14975 620 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 AFPP02771 609 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 GCNT4Q9P109 453 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ABCC12Q96J65 1359 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 PSMC2P35998 433 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 ZNF644Q9H582 1327 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 CFAP43Q8NDM7 1665 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 HNRNPDLO14979 420 aaKnown RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 TRIM62Q9BVG3 475 aa20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 H2AFY2Q9P0M6 372 aaPredicted RBP20.65■□□□□ 0.9
CACNA1A-257ENST00000638009 SAC3D1A6NKF1 404 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 ARL4CP56559 192 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 PNOCQ13519 176 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 PRUNE1Q86TP1 453 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 MLXIPQ9HAP2 919 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 NESP48681 1621 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 CLK1P49759 484 aaKnown RBP20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 FOXP3Q9BZS1 431 aa20.64■□□□□ 0.9
CACNA1A-257ENST00000638009 M0R3G1 203 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 EIF6P56537 245 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 RCSD1Q6JBY9 416 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 PRPF18Q99633 342 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 CALN1Q9BXU9 219 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 STON1Q9Y6Q2 735 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 A0A0G2JND7 137 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 SLFN12LQ6IEE8 588 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 PPP1R13BQ96KQ4 1090 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 HACD3Q9P035 362 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 AP4S1Q9Y587 144 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 ABCC5O15440 1437 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 RASA4BC9J798 803 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 RASA4O43374 803 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 TMEM206Q9H813 350 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 USP40Q9NVE5 1235 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 SUPT3HO75486 399 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 OTULINQ96BN8 352 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 CARD9Q9H257 536 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 DAB2IPQ5VWQ8 1189 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 DZIP3Q86Y13 1208 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 FAM129AQ9BZQ8 928 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 RGL1Q9NZL6 768 aa20.64■□□□□ 0.89
CACNA1A-257ENST00000638009 CFBP00751 764 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 PRKCQQ04759 706 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 PLEKHA8Q96JA3 519 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 SCFD1Q8WVM8 642 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 MAML3Q96JK9 1138 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 MAP3K1Q13233 1512 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 WASLO00401 505 aaPredicted RBP20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 GPAA1O43292 621 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 E2F4Q16254 413 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 KIAA1841Q6NSI8 718 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 PDCD10Q9BUL8 212 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 MROH5Q6ZUA9 1318 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 FAM45BPQ6NSW5 357 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 RHOT2Q8IXI1 618 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 DDI1Q8WTU0 396 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 TMEM161AQ9NX61 479 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 PPIP5K1Q6PFW1 1433 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 DIAPH2O60879 1101 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 RASSF3Q86WH2 238 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 TEKT3Q9BXF9 490 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 NELFCDQ8IXH7 590 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 CDHR1Q96JP9 859 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 CHMP2BQ9UQN3 213 aa20.63■□□□□ 0.89
CACNA1A-257ENST00000638009 CMTM5Q96DZ9 223 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 DESI2Q9BSY9 194 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 ARID1BQ8NFD5 2236 aaPredicted RBP20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 OR52Z1P0C646 297 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 COPS6Q7L5N1 327 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 ADAM30Q9UKF2 790 aa20.62■□□□□ 0.89
CACNA1A-257ENST00000638009 BTNL9Q6UXG8 535 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms