RNA–Protein interactions for RNA: ENST00000637952.1

CACNA1A-254, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-254ENST00000637952 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 CNNM4Q6P4Q7 775 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 PADI6Q6TGC4 694 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 NELFCDQ8IXH7 590 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 GRAMD1CQ8IYS0 662 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 TRIM44Q96DX7 344 aaPredicted RBP9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 PANK4Q9NVE7 773 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 STK17AQ9UEE5 414 aa9.52□□□□□ -0.89
CACNA1A-254ENST00000637952 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 INHAP05111 366 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 YWHABP31946 246 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TERF1P54274 439 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 MRPS9P82933 396 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 DMP1Q13316 513 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 FSCN1Q16658 493 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 CCDC40Q4G0X9 1142 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 CTU1Q7Z7A3 348 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 EXOC8Q8IYI6 725 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 FBXO2Q9UK22 296 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 DIS3Q9Y2L1 958 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 UBIAD1Q9Y5Z9 338 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 KIAA0100Q14667 2235 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 FAM155AB1AL88 458 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 H3BRB1 525 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 ZNF500O60304 480 aaPredicted RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 MSCO60682 206 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 FGFR1OPO95684 399 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 DDIT3P35638 169 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 PRKCEQ02156 737 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 GRIN1Q05586 938 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 GRB14Q14449 540 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 LONRF3Q496Y0 759 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 HSP90AA4PQ58FG1 418 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TUT1Q9H6E5 874 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 STARD7Q9NQZ5 370 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 ADAMTS5Q9UNA0 930 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 PTCH2Q9Y6C5 1203 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 UTRNP46939 3433 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TIAM2Q8IVF5 1701 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 SMTNL1A8MU46 457 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TPM1P09493 284 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 SLFN14P0C7P3 912 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 ZNF286BP0CG31 522 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 NPEPPSP55786 919 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TFDP1Q14186 410 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 STX1AQ16623 288 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 PLA2G4FQ68DD2 849 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 TRIM50Q86XT4 487 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 ZNF579Q8NAF0 562 aaKnown RBP9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 REPS2Q8NFH8 660 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 RPS6KL1Q9Y6S9 549 aa9.51□□□□□ -0.89
CACNA1A-254ENST00000637952 DOCK2Q92608 1830 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 LOC102724159A0A0B4J2E5 919 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 K7ENM7 598 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PPFIA4O75335 1185 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 CNMDO75829 334 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 ERLIN2O94905 339 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 CIITAP33076 1130 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PWP2Q15269 919 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 TSHZ1Q6ZSZ6 1077 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 NIPA1Q7RTP0 329 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 GTPBP4Q9BZE4 634 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 MMRN2Q9H8L6 949 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 TUFT1Q9NNX1 390 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 SLC39A2Q9NP94 309 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 NID2Q14112 1375 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 CCDC85CA6NKD9 419 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 ADAMTS3O15072 1205 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 SUPT20HL2P0C7V6 817 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 ZNF165P49910 485 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PPP2R5AQ15172 486 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 SHC4Q6S5L8 630 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 DRC1Q96MC2 740 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 INPP4AQ96PE3 977 aaPredicted RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 SENP7Q9BQF6 1050 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 TRIM5Q9C035 493 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PCDHB13Q9Y5F0 798 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 SPATA31C2B4DYI2 1134 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 GTPBP6O43824 516 aaPredicted RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 HBP1O60381 514 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 MTIF2P46199 727 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PEX3P56589 373 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 CELF3Q5SZQ8 465 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 CATSPER3Q86XQ3 398 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 RHPN2Q8IUC4 686 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 MCPH1Q8NEM0 835 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PPP1R13LQ8WUF5 828 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 LENG1Q96BZ8 264 aaPredicted RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 ATP6V0A4Q9HBG4 840 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 KMT5AQ9NQR1 393 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 DDX41Q9UJV9 622 aaKnown RBP9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 EXOC7Q9UPT5 735 aa9.5□□□□□ -0.89
CACNA1A-254ENST00000637952 TLR3O15455 904 aaKnown RBP9.49□□□□□ -0.89
CACNA1A-254ENST00000637952 RPA1P27694 616 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms