RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 NEK9Q8TD19 979 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 TRPM4Q8TD43 1214 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 ATG4CQ96DT6 458 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 WNK4Q96J92 1243 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 CCDC42Q96M95 316 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 TAAR1Q96RJ0 339 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 PARVGQ9HBI0 331 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 AS3MTQ9HBK9 375 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 AGO4Q9HCK5 861 aaKnown RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 KCND2Q9NZV8 630 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 CEP72Q9P209 647 aa18.24■□□□□ 0.51
CTSD-213ENST00000637915 CTDP1Q9Y5B0 961 aaPredicted RBP18.24■□□□□ 0.51
CTSD-213ENST00000637915 ZMYM2Q9UBW7 1377 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 RLFQ13129 1914 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 ZNF263O14978 683 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 EIF3DO15371 548 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTSD-213ENST00000637915 H2AFXP16104 143 aaPredicted RBP18.23■□□□□ 0.51
CTSD-213ENST00000637915 ZNF131P52739 623 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 CYP27A1Q02318 531 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 FRMD5Q7Z6J6 570 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 JAKMIP2Q96AA8 810 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 TRERF1Q96PN7 1200 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 LSM14BQ9BX40 385 aaKnown RBP18.23■□□□□ 0.51
CTSD-213ENST00000637915 LACRTQ9GZZ8 138 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 JADE2Q9NQC1 790 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 PICK1Q9NRD5 415 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 PNMA2Q9UL42 364 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 PHIPQ8WWQ0 1821 aa18.23■□□□□ 0.51
CTSD-213ENST00000637915 COL11A1P12107 1806 aaPredicted RBP18.23■□□□□ 0.51
CTSD-213ENST00000637915 NR3C1P04150 777 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 FDX1P10109 184 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 EIF2AK2P19525 551 aaKnown RBP18.22■□□□□ 0.51
CTSD-213ENST00000637915 NMT1P30419 496 aaKnown RBP18.22■□□□□ 0.51
CTSD-213ENST00000637915 KCNH2Q12809 1159 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 MTMR1Q13613 665 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 TUBB2AQ13885 445 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 PGM5Q15124 567 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 RSRC2Q7L4I2 434 aaKnown RBP18.22■□□□□ 0.51
CTSD-213ENST00000637915 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 FIZ1Q96SL8 496 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 CRACR2AQ9BSW2 395 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 TUBB2BQ9BVA1 445 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 ARMCX3Q9UH62 379 aaPredicted RBP18.22■□□□□ 0.51
CTSD-213ENST00000637915 ODF2LQ9ULJ1 636 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 TGFB1I1O43294 461 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 KRT86O43790 486 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 AKAP3O75969 853 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 VAV2P52735 878 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 SEL1LQ9UBV2 794 aa18.22■□□□□ 0.51
CTSD-213ENST00000637915 LCA5LO95447 670 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 GUCY2CP25092 1073 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 EIF4A3P38919 411 aaKnown RBP18.21■□□□□ 0.51
CTSD-213ENST00000637915 KIF11P52732 1056 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 SPA17Q15506 151 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 ZC2HC1CQ53FD0 456 aaPredicted RBP18.21■□□□□ 0.51
CTSD-213ENST00000637915 RNF207Q6ZRF8 634 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 NLRC4Q9NPP4 1024 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 GPRC5DQ9NZD1 345 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 RIPK3Q9Y572 518 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
CTSD-213ENST00000637915 ARHGEF35A5YM69 484 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 SLC16A3O15427 465 aaKnown RBP18.21■□□□□ 0.5
CTSD-213ENST00000637915 P4HBP07237 508 aaKnown RBP18.21■□□□□ 0.5
CTSD-213ENST00000637915 RPL13P26373 211 aaKnown RBP18.21■□□□□ 0.5
CTSD-213ENST00000637915 EPS15P42566 896 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 POLR2FP61218 127 aaKnown RBP18.21■□□□□ 0.5
CTSD-213ENST00000637915 AMPD2Q01433 879 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 APBA1Q02410 837 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 HGSNATQ68CP4 663 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 SRGAP1Q7Z6B7 1085 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 GPIHBP1Q8IV16 184 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 REPS2Q8NFH8 660 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 C12orf42Q96LP6 360 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 RMDN3Q96TC7 470 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 PDCD2LQ9BRP1 358 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 PXMP2Q9NR77 195 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 GGA3Q9NZ52 723 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 ZHX2Q9Y6X8 837 aa18.21■□□□□ 0.5
CTSD-213ENST00000637915 CLIC2O15247 247 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 CASP4P49662 377 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 HMGCS2P54868 508 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 NSMFQ6X4W1 530 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 ZNF720Q7Z2F6 126 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 EHBP1Q8NDI1 1231 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 SYN2Q92777 582 aaPredicted RBP18.2■□□□□ 0.5
CTSD-213ENST00000637915 PURBQ96QR8 312 aaKnown RBP18.2■□□□□ 0.5
CTSD-213ENST00000637915 NUCKS1Q9H1E3 243 aaKnown RBP18.2■□□□□ 0.5
CTSD-213ENST00000637915 IKZF4Q9H2S9 585 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 ZSWIM4Q9H7M6 989 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 RNF146Q9NTX7 359 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 UBE4BO95155 1302 aa18.2■□□□□ 0.5
CTSD-213ENST00000637915 AFPP02771 609 aaKnown RBP18.19■□□□□ 0.5
CTSD-213ENST00000637915 MYCLP12524 364 aaPredicted RBP18.19■□□□□ 0.5
CTSD-213ENST00000637915 XRCC5P13010 732 aaKnown RBP18.19■□□□□ 0.5
CTSD-213ENST00000637915 MAPK7Q13164 816 aa18.19■□□□□ 0.5
CTSD-213ENST00000637915 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
CTSD-213ENST00000637915 ODR4Q5SWX8 454 aa18.19■□□□□ 0.5
CTSD-213ENST00000637915 TEX35Q5T0J7 233 aa18.19■□□□□ 0.5
CTSD-213ENST00000637915 FAM178BQ8IXR5 827 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms