RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SMCHD1A6NHR9 2005 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CYP3A7-CYP3A51PA0A087WV96 503 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 GOLGA8IPA6NC78 632 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 GOLGA8JA6NMD2 632 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 TRIM49P0CI25 452 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 TRIM49CP0CI26 452 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CYP3A7P24462 503 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CXCR5P32302 372 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 PEX3P56589 373 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 MRPS25P82663 173 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 GFPT1Q06210 699 aaPredicted RBP10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 COG2Q14746 738 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 SFMBT2Q5VUG0 894 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 STXBP4Q6ZWJ1 553 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 ZNF507Q8TCN5 953 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CNKSR2Q8WXI2 1034 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CCDC127Q96BQ5 260 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 DCPSQ96C86 337 aaKnown RBP10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 OTUD5Q96G74 571 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 CSADQ9Y600 493 aa10.64□□□□□ -0.71
CACNA1A-248ENST00000637774 PNMA6AP0CW24 399 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SLC9A1P19634 815 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 GTF2F1P35269 517 aaKnown RBP eCLIP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 KCNJ6P48051 423 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 EXOC3L4Q17RC7 722 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SLC9C1Q4G0N8 1177 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 CCDC181Q5TID7 509 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 LACRTQ9GZZ8 138 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 PPP1R9AQ9ULJ8 1098 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 CTAGE15A4D2H0 777 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 HIP1RO75146 1068 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SEC31AO94979 1220 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 TUBB4AP04350 444 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 CTAGE8P0CG41 777 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 HARSP12081 509 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 RPS12P25398 132 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 KIF11P52732 1056 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 MOXD1Q6UVY6 613 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 CTAGE6Q86UF2 777 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 CTAGE4Q8IX94 777 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 FAM186BQ8IYM0 893 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 FBXO41Q8TF61 875 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 KIFC3Q9BVG8 833 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 MLXIPQ9HAP2 919 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 LARSQ9P2J5 1176 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 VAV3Q9UKW4 847 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 C10orf71Q711Q0 1435 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 COL11A2P13942 1736 aaPredicted RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 IGLV3-22A0A075B6J6 115 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 TBC1D12O60347 775 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 ATP9AO75110 1047 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SOX10P56693 466 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SPIRE1Q08AE8 756 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 TKFCQ3LXA3 575 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SUPT20HL1Q3ZLR7 823 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 WDR59Q6PJI9 974 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 LRRC55Q6ZSA7 311 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 MOB2Q70IA6 237 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SCYL3Q8IZE3 742 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 SECISBP2LQ93073 1101 aaKnown RBP10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 KIAA1683Q9H0B3 1180 aa10.63□□□□□ -0.71
CACNA1A-248ENST00000637774 ADM5C9JUS6 153 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 FANCGO15287 622 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 CTIFO43310 598 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 PSMD10O75832 226 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 MOCS3O95396 460 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 CIITAP33076 1130 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 IRX3P78415 501 aaPredicted RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 EPHA7Q15375 998 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GJB7Q6PEY0 223 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GOLGA1Q92805 767 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 CEP170P1Q96L14 293 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GDAP1L1Q96MZ0 367 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 TEPSINQ96N21 525 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GBP3Q9H0R5 595 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 HAUS4Q9H6D7 363 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 PHF20L1A8MW92 1017 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 TISP43B9A030 160 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 VWA5AO00534 786 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 SLC16A4O15374 487 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 LRRN2O75325 713 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 AKAP3O75969 853 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GNA14O95837 355 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 NR3C2P08235 984 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 KRT13P13646 458 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 PTPRAP18433 802 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 RETREG2Q8NC44 543 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 ELP3Q9H9T3 547 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 GCNT4Q9P109 453 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 PIK3CDO00329 1044 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 TACC1O75410 805 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 ZMYND10O75800 440 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 AFPP02771 609 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 P4HBP07237 508 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 QARSP47897 775 aaKnown RBP10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 ASIC2Q16515 512 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
CACNA1A-248ENST00000637774 SWSAP1Q6NVH7 229 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms