RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 PHLPP1O60346 1717 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 MYH4Q9Y623 1939 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 F8VZ95 297 aa22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 CTNND1O60716 968 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 ZBTB48P10074 688 aaPredicted RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 UBAP2Q5T6F2 1119 aaKnown RBP22.03■■□□□ 1.12
CACNA1A-243ENST00000637616 RPSAP08865 295 aaKnown RBP22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 SLC16A2P36021 539 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 GLG1Q92896 1179 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 SGSM3Q96HU1 749 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 NLRP3Q96P20 1036 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 PSMD1Q99460 953 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 IKZF4Q9H2S9 585 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 ACTR5Q9H9F9 607 aaPredicted RBP22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 MEIS1O00470 390 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 PON1P27169 355 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 ELF1P32519 619 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 CCDC65Q8IXS2 484 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 SELENOSQ9BQE4 189 aa22.02■■□□□ 1.12
CACNA1A-243ENST00000637616 CETN3O15182 167 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 ABCB4P21439 1286 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 DRD4P21917 467 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 BTDP43251 543 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 ZNF211Q13398 564 aaPredicted RBP22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 NEDD1Q8NHV4 660 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 SRP68Q9UHB9 627 aaKnown RBP22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 EXOC3L4Q17RC7 722 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 TTBK2Q6IQ55 1244 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 LRRC27Q9C0I9 530 aa22.01■■□□□ 1.11
CACNA1A-243ENST00000637616 CLSTN1O94985 981 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 DPY19L2P1Q6NXN4 242 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 GGT7Q9UJ14 662 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 UTP11Q9Y3A2 253 aaKnown RBP22■■□□□ 1.11
CACNA1A-243ENST00000637616 POTEFA5A3E0 1075 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 PPP1R12BO60237 982 aaPredicted RBP22■■□□□ 1.11
CACNA1A-243ENST00000637616 PPP1R11O60927 126 aaPredicted RBP22■■□□□ 1.11
CACNA1A-243ENST00000637616 GFPT2O94808 682 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 POTEIP0CG38 1075 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 DRP2Q13474 957 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 POTEGQ6S5H5 508 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 POTEEQ6S8J3 1075 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 CCT6BQ92526 530 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 RIOX1Q9H6W3 641 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 SNED1Q8TER0 1413 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 GNA14O95837 355 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 CYP11B2P19099 503 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 CASP4P49662 377 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 PPP1R7Q15435 360 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 ARSHQ5FYA8 562 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 AGBL2Q5U5Z8 902 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 TEX11Q8IYF3 940 aa22■■□□□ 1.11
CACNA1A-243ENST00000637616 ARMCX3Q9UH62 379 aaPredicted RBP22■■□□□ 1.11
CACNA1A-243ENST00000637616 DDX3XO00571 662 aaKnown RBP eCLIP21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 CLIC2O15247 247 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 PSMC6P62333 389 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 HIBCHQ6NVY1 386 aaPredicted RBP21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 AADACL2Q6P093 401 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 ARHGAP27Q6ZUM4 889 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 NT5DC3Q86UY8 548 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 CCDC26Q8TAB7 109 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 ANKRD2Q9GZV1 360 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 BAIAP2L1Q9UHR4 511 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 PPP1R9AQ9ULJ8 1098 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 SPDYE3A6NKU9 549 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 H2AFZP0C0S5 128 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 CHN1P15882 459 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 H2AFVQ71UI9 128 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 NBPF5PQ86XG9 351 aaPredicted RBP21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 XPO6Q96QU8 1125 aaKnown RBP21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 ERVK-5Q9HDB9 667 aa21.99■■□□□ 1.11
CACNA1A-243ENST00000637616 RAD21O60216 631 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 MTMR3Q13615 1198 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 C16orf86Q6ZW13 317 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 CHMP6Q96FZ7 201 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 CALR3Q96L12 384 aaKnown RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 FMO2Q99518 471 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 CCDC88AQ3V6T2 1871 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 SRRM3A6NNA2 597 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L15C9J2P7 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L13C9JLJ4 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L11C9JVI0 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L18D6R9N7 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L22D6RA61 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L17D6RBQ6 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L19D6RCP7 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L20D6RJB6 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 AKAP3O75969 853 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 PLTPP55058 493 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 IFI35P80217 286 aaPredicted RBP21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 KCNA1Q09470 495 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L24Q0WX57 530 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 WLSQ5T9L3 541 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 USP17L6PQ6QN14 398 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 DONSONQ9NYP3 566 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 SNX24Q9Y343 169 aa21.98■■□□□ 1.11
CACNA1A-243ENST00000637616 CEP83Q9Y592 693 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms