RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 GALNT17Q6IS24 598 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 TSHZ1Q6ZSZ6 1077 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 NME8Q8N427 588 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 ATP8B4Q8TF62 1192 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 TOP1MTQ969P6 601 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 MTUS1Q9ULD2 1270 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 PCDHA10Q9Y5I2 948 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 TRPV2Q9Y5S1 764 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 MTCH2Q9Y6C9 303 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 MICAL3Q7RTP6 2002 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 COL1A2P08123 1366 aa21.48■■□□□ 1.03
CLN6-221ENST00000637494 CDH23Q9H251 3354 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 SMIM35A0A1B0GVV1 85 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 ADAMTS3O15072 1205 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 ERVK-21P61565 698 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 HTRA4P83105 476 aaPredicted RBP21.47■■□□□ 1.03
CLN6-221ENST00000637494 GRB10Q13322 594 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 MKRN4PQ13434 485 aaPredicted RBP21.47■■□□□ 1.03
CLN6-221ENST00000637494 LPIN1Q14693 890 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 ZNF484Q5JVG2 852 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 FBXO47Q5MNV8 452 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 MTHFD1LQ6UB35 978 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 CCDC60Q8IWA6 550 aaPredicted RBP21.47■■□□□ 1.03
CLN6-221ENST00000637494 BLIDQ8IZY5 108 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 TRAPPC12Q8WVT3 735 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 SAMD11Q96NU1 681 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 UIMC1Q96RL1 719 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 SQORQ9Y6N5 450 aa21.47■■□□□ 1.03
CLN6-221ENST00000637494 EPOPA6NHQ4 379 aa21.46■■□□□ 1.03
CLN6-221ENST00000637494 KLRC1P26715 233 aa21.46■■□□□ 1.03
CLN6-221ENST00000637494 MRPS5P82675 430 aaKnown RBP21.46■■□□□ 1.03
CLN6-221ENST00000637494 TBCKQ8TEA7 893 aa21.46■■□□□ 1.03
CLN6-221ENST00000637494 BBXQ8WY36 941 aaPredicted RBP21.46■■□□□ 1.03
CLN6-221ENST00000637494 PRDM6Q9NQX0 595 aa21.46■■□□□ 1.03
CLN6-221ENST00000637494 LMCD1Q9NZU5 365 aa21.46■■□□□ 1.03
CLN6-221ENST00000637494 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.45■■□□□ 1.02
CLN6-221ENST00000637494 WDR64B1ANS9 1081 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 GAS7O60861 476 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 AAK1Q2M2I8 961 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 FBXO22Q8NEZ5 403 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 ZBTB10Q96DT7 871 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 FAM167AQ96KS9 214 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 RIT2Q99578 217 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 TEKT3Q9BXF9 490 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 FTHL17Q9BXU8 183 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 OSBPL7Q9BZF2 842 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 CEP131Q9UPN4 1083 aa21.45■■□□□ 1.02
CLN6-221ENST00000637494 MYO9BQ13459 2157 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 CHD9Q3L8U1 2897 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 TMEM62Q0P6H9 643 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 ODR4Q5SWX8 454 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 DAGLBQ8NCG7 672 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 SP7Q8TDD2 431 aaPredicted RBP21.44■■□□□ 1.02
CLN6-221ENST00000637494 GDPD5Q8WTR4 605 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 IL17RAQ96F46 866 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 CELF4Q9BZC1 486 aaKnown RBP21.44■■□□□ 1.02
CLN6-221ENST00000637494 GABBR1Q9UBS5 961 aa21.44■■□□□ 1.02
CLN6-221ENST00000637494 MAFBQ9Y5Q3 323 aaPredicted RBP21.44■■□□□ 1.02
CLN6-221ENST00000637494 CD52P31358 61 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 SFNP31947 248 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 JAK3P52333 1124 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 SCRN1Q12765 414 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 PAK2Q13177 524 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 NONOQ15233 471 aaKnown RBP eCLIP21.43■■□□□ 1.026e-7■■■□□ 17.3
CLN6-221ENST00000637494 LRCH2Q5VUJ6 765 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 FAM43BQ6ZT52 329 aaPredicted RBP21.43■■□□□ 1.02
CLN6-221ENST00000637494 KRT25Q7Z3Z0 450 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 WASF1Q92558 559 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 ASB2Q96Q27 587 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 SUGCTQ9HAC7 445 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 DISC1Q9NRI5 854 aa21.43■■□□□ 1.02
CLN6-221ENST00000637494 CCDC194A0A1B0GVG4 234 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 MSH4O15457 936 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 PFKFB2O60825 505 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 Q4G0T1 1027 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 TRMT1LQ7Z2T5 733 aaKnown RBP21.42■■□□□ 1.02
CLN6-221ENST00000637494 SPRED2Q7Z698 418 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 FIBCD1Q8N539 461 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 LENG9Q96B70 501 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 C17orf80Q9BSJ5 609 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 STK36Q9NRP7 1315 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 NRBP2Q9NSY0 501 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 TPCN1Q9ULQ1 816 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 COG5Q9UP83 839 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 GINS2Q9Y248 185 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 KDM3AQ9Y4C1 1321 aa21.42■■□□□ 1.02
CLN6-221ENST00000637494 IGSF9BQ9UPX0 1349 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 ENPP3O14638 875 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 CHMP2AO43633 222 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 AK2P54819 239 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 PTPROQ16827 1216 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 KRT40Q6A162 431 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 METTL13Q8N6R0 699 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 SLC5A5Q92911 643 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 RNF216Q9NWF9 866 aaPredicted RBP21.41■■□□□ 1.02
CLN6-221ENST00000637494 RWDD3Q9Y3V2 267 aa21.41■■□□□ 1.02
CLN6-221ENST00000637494 COL4A4P53420 1690 aaPredicted RBP21.4■■□□□ 1.02
CLN6-221ENST00000637494 MAGEB2O15479 319 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 LPXNO60711 386 aa21.4■■□□□ 1.02
CLN6-221ENST00000637494 STAG3L1P0CL83 205 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms