RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 ZNF746Q6NUN9 644 aaPredicted RBP17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 SWSAP1Q6NVH7 229 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 CKAP2LQ8IYA6 745 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 ATP8B4Q8TF62 1192 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 ATXN2LQ8WWM7 1075 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 SYMPKQ92797 1274 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
CACNA1A-230ENST00000636768 HBP1O60381 514 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 CDKL5O76039 1030 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 ERVK-21P61565 698 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 HTRA4P83105 476 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 KRT76Q01546 638 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 TMEM62Q0P6H9 643 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 FBXO47Q5MNV8 452 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 TSHZ1Q6ZSZ6 1077 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 SMAP1Q8IYB5 467 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 TOP1MTQ969P6 601 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 C22orf23Q9BZE7 217 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 PCDHA4Q9UN74 947 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 SAMM50Q9Y512 469 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 TRPV2Q9Y5S1 764 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 CUL9Q8IWT3 2517 aa17.01■□□□□ 0.31
CACNA1A-230ENST00000636768 PSAPP07602 524 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 MRPS5P82675 430 aaKnown RBP17■□□□□ 0.31
CACNA1A-230ENST00000636768 MTHFD1LQ6UB35 978 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 IL27Q8NEV9 243 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 FBXO22Q8NEZ5 403 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 TBCKQ8TEA7 893 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
CACNA1A-230ENST00000636768 PCDHA10Q9Y5I2 948 aa17■□□□□ 0.31
CACNA1A-230ENST00000636768 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 LPXNO60711 386 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 KLRC1P26715 233 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 CD52P31358 61 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 USP11P51784 963 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 ANAPC15P60006 121 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 ZNF484Q5JVG2 852 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 TRMT1LQ7Z2T5 733 aaKnown RBP16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 BLIDQ8IZY5 108 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 NME8Q8N427 588 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 SP7Q8TDD2 431 aaPredicted RBP16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 LENG9Q96B70 501 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 AIFM3Q96NN9 605 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 ASB2Q96Q27 587 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 C17orf80Q9BSJ5 609 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 SUGCTQ9HAC7 445 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 COL1A2P08123 1366 aa16.99■□□□□ 0.31
CACNA1A-230ENST00000636768 MYO9BQ13459 2157 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 PTPRSQ13332 1948 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 WDR64B1ANS9 1081 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 MSH4O15457 936 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 GAS7O60861 476 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 SCRN1Q12765 414 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 PAK2Q13177 524 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 ANKRD1Q15327 319 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 GALNT17Q6IS24 598 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 DAGLBQ8NCG7 672 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 BBXQ8WY36 941 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 CELF4Q9BZC1 486 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 AGO3Q9H9G7 860 aaKnown RBP16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 LMCD1Q9NZU5 365 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 GABBR1Q9UBS5 961 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 TPCN1Q9ULQ1 816 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 GINS2Q9Y248 185 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 MAFBQ9Y5Q3 323 aaPredicted RBP16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 SQORQ9Y6N5 450 aa16.98■□□□□ 0.31
CACNA1A-230ENST00000636768 CHMP2AO43633 222 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 EIF5BO60841 1220 aaKnown RBP16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 XBP1P17861 261 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 LRCH2Q5VUJ6 765 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 IL17RAQ96F46 866 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 FAM167AQ96KS9 214 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 SAMD11Q96NU1 681 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 RIT2Q99578 217 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 TEKT3Q9BXF9 490 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 DISC1Q9NRI5 854 aa16.97■□□□□ 0.31
CACNA1A-230ENST00000636768 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 ZBTB42B2RXF5 422 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 ENPP3O14638 875 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 PFKFB2O60825 505 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 TDP2O95551 362 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 ATP4AP20648 1035 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 AK2P54819 239 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 NONOQ15233 471 aaKnown RBP eCLIP16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 AAK1Q2M2I8 961 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 EPC2Q52LR7 807 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 KRT25Q7Z3Z0 450 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 SLC5A5Q92911 643 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 FTHL17Q9BXU8 183 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 KCNJ14Q9UNX9 436 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 CEP131Q9UPN4 1083 aa16.96■□□□□ 0.31
CACNA1A-230ENST00000636768 STK36Q9NRP7 1315 aa16.96■□□□□ 0.3
CACNA1A-230ENST00000636768 KDM3AQ9Y4C1 1321 aa16.96■□□□□ 0.3
CACNA1A-230ENST00000636768 VCANP13611 3396 aa16.95■□□□□ 0.3
CACNA1A-230ENST00000636768 EDIL3O43854 480 aa16.95■□□□□ 0.3
CACNA1A-230ENST00000636768 C22orf31O95567 290 aa16.95■□□□□ 0.3
CACNA1A-230ENST00000636768 SFNP31947 248 aa16.95■□□□□ 0.3
CACNA1A-230ENST00000636768 JAK3P52333 1124 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms