RNA–Protein interactions for RNA: ENST00000636044.1

CHRNA7-209, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-209ENST00000636044 PCDHA10Q9Y5I2 948 aa23.27■■□□□ 1.32
CHRNA7-209ENST00000636044 CDH23Q9H251 3354 aa23.27■■□□□ 1.32
CHRNA7-209ENST00000636044 RBAK-RBAKDNI3L0D1 243 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 CHMP2AO43633 222 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 HBP1O60381 514 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 NR5A1Q13285 461 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 TCTN1Q2MV58 587 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 LLPHQ9BRT6 129 aaKnown RBP23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 IGSF9BQ9UPX0 1349 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 COL1A2P08123 1366 aa23.26■■□□□ 1.31
CHRNA7-209ENST00000636044 ABHD14A-ACY1A0A1B0GW23 586 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 FAM205CA6NFA0 338 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 SLC37A4O43826 429 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 MMP1P03956 469 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 GCFC2P16383 781 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 JAK3P52333 1124 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 WDR5P61964 334 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 FAM26DQ5JW98 314 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 ETNPPLQ8TBG4 499 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 PHOSPHO2Q8TCD6 241 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 DNAJB3Q8WWF6 145 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 FAM49AQ9H0Q0 323 aaPredicted RBP23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 UNC45AQ9H3U1 944 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 DISC1Q9NRI5 854 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 GABBR1Q9UBS5 961 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 YBX2Q9Y2T7 364 aaKnown RBP23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 PCDHA11Q9Y5I1 949 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 MAFBQ9Y5Q3 323 aaPredicted RBP23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 CHD7Q9P2D1 2997 aa23.25■■□□□ 1.31
CHRNA7-209ENST00000636044 EFCAB14O75071 495 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 PSMD10O75832 226 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 RPLP2P05387 115 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 SFNP31947 248 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 IKBKEQ14164 716 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 PLEKHG4Q58EX7 1191 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 EARS2Q5JPH6 523 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 KRT40Q6A162 431 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 TNFRSF25Q93038 417 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 NAP1L4Q99733 375 aaKnown RBP23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 NKX2-4Q9H2Z4 354 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 ZNF576Q9H609 170 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 STXBP5LQ9Y2K9 1186 aa23.24■■□□□ 1.31
CHRNA7-209ENST00000636044 ST18O60284 1047 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 CCNT1O60563 726 aaKnown RBP23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 CHRNA1P02708 482 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 ATP4AP20648 1035 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 DEFB103AP81534 67 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 MGAT3Q09327 533 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 PPP4R3AQ6IN85 833 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 HERC6Q8IVU3 1022 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 DIS3L2Q8IYB7 885 aaKnown RBP23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 DBF4BQ8NFT6 615 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 BBXQ8WY36 941 aaPredicted RBP23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 SEPT8Q92599 483 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 CDX2Q99626 313 aaPredicted RBP23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 OSBPL7Q9BZF2 842 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 PCDHA2Q9Y5H9 948 aa23.23■■□□□ 1.31
CHRNA7-209ENST00000636044 MYOGP15173 224 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 MRPS6P82932 125 aaKnown RBP23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 ZNF484Q5JVG2 852 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 MTHFD1LQ6UB35 978 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 TRMT1LQ7Z2T5 733 aaKnown RBP23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 MIER3Q7Z3K6 550 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 RDM1Q8NG50 284 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 FAM167AQ96KS9 214 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 TBC1D32Q96NH3 1257 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 CDY2AQ9Y6F7 541 aa23.22■■□□□ 1.31
CHRNA7-209ENST00000636044 ZBTB42B2RXF5 422 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 BTBD18B2RXH4 712 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 GHRP10912 638 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 KLRC1P26715 233 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 HMGN5P82970 282 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 GUCY1B3Q02153 619 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 UGCGQ16739 394 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 PPP2R2DQ66LE6 453 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 C8orf76Q96K31 380 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 IFIH1Q9BYX4 1025 aaKnown RBP23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 SLC28A3Q9HAS3 691 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 KCNMB3Q9NPA1 279 aa23.21■■□□□ 1.31
CHRNA7-209ENST00000636044 SMIM35A0A1B0GVV1 85 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 M0QZ92 97 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 PRKCEQ02156 737 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 GRIN2CQ14957 1233 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 SAFBQ15424 915 aaKnown RBP eCLIP23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 IER5Q5VY09 327 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 B3GNT9Q6UX72 402 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 TMCO2Q7Z6W1 182 aaPredicted RBP23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 MYLIPQ8WY64 445 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 FAM20AQ96MK3 541 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 CEP131Q9UPN4 1083 aa23.2■■□□□ 1.3
CHRNA7-209ENST00000636044 KIF28PB7ZC32 967 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 ZNF862O60290 1169 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 OATP04181 439 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 CA3P07451 260 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 TMEM62Q0P6H9 643 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 MKRN4PQ13434 485 aaPredicted RBP23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 FAM184AQ8NB25 1140 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 APBB2Q92870 758 aa23.19■■□□□ 1.3
CHRNA7-209ENST00000636044 TRPV2Q9Y5S1 764 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms