RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 PARNO95453 639 aaKnown RBP16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 OATP04181 439 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 CKBP12277 381 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 RFC2P35250 354 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 TXKP42681 527 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 PSMC5P62195 406 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 PRKCEQ02156 737 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 PPIGQ13427 754 aaKnown RBP eCLIP16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 EPHA7Q15375 998 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 UGCGQ16739 394 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZNF484Q5JVG2 852 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 MARCH8Q5T0T0 291 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 NCAPH2Q6IBW4 605 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 RPAINQ86UA6 219 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 NEK9Q8TD19 979 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 PCDH10Q9P2E7 1040 aa16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 COLQQ9Y215 455 aaPredicted RBP16.58■□□□□ 0.24
CDC42BPB-209ENST00000634889 STX6O43752 255 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZNF862O60290 1169 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 P4HBP07237 508 aaKnown RBP16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 PFKMP08237 780 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 IQCF3P0C7M6 154 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 CSF2RAP15509 400 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 SELPP16109 830 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 QARSP47897 775 aaKnown RBP16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 CCL23P55773 120 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 NBR1Q14596 966 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 LRRC8DQ7L1W4 858 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 C4orf32Q8N8J7 132 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 WNT8BQ93098 351 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 NRBP2Q9NSY0 501 aa16.57■□□□□ 0.24
CDC42BPB-209ENST00000634889 RANBP2P49792 3224 aaKnown RBP16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZBTB42B2RXF5 422 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 PRPHP41219 470 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 FXR2P51116 673 aaKnown RBP eCLIP16.56■□□□□ 0.244e-6■■□□□ 13.5
CDC42BPB-209ENST00000634889 IGBP1P78318 339 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 PTGDRQ13258 359 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 TMEM266Q2M3C6 531 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 XKR3Q5GH77 459 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 BANK1Q8NDB2 785 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 IL23AQ9NPF7 189 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 MTMR6Q9Y217 621 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 PCDHA2Q9Y5H9 948 aa16.56■□□□□ 0.24
CDC42BPB-209ENST00000634889 KLRC1P26715 233 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 THPOP40225 353 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZNF618Q5T7W0 954 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 PSRC1Q6PGN9 363 aaPredicted RBP16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 MTHFD1LQ6UB35 978 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 FERMT3Q86UX7 667 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 C4orf19Q8IY42 314 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 RPUSD2Q8IZ73 545 aaKnown RBP16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 TDHQ8IZJ6 230 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 SCLYQ96I15 445 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 LXNQ9BS40 222 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 NIFKQ9BYG3 293 aaKnown RBP16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 RAB34Q9BZG1 259 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZSCAN16Q9H4T2 348 aaPredicted RBP16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 ZSWIM4Q9H7M6 989 aa16.55■□□□□ 0.24
CDC42BPB-209ENST00000634889 SMIM35A0A1B0GVV1 85 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 POTEMA6NI47 508 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 MAGEB2O15479 319 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 STBD1O95210 358 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 C22orf31O95567 290 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 BMP15O95972 392 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 TECP42680 631 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 EPHB4P54760 987 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 ATP2C1P98194 919 aaPredicted RBP16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 RESTQ13127 1097 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 BECN1Q14457 450 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 PDIA5Q14554 519 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 TRAF7Q6Q0C0 670 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 RUFY4Q6ZNE9 571 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 HSD17B14Q9BPX1 270 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 EIF2AK1Q9BQI3 630 aaKnown RBP16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 SEPT9Q9UHD8 586 aaPredicted RBP16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 PPME1Q9Y570 386 aa16.54■□□□□ 0.24
CDC42BPB-209ENST00000634889 RSPH10B2B2RC85 870 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 LYPLA2O95372 231 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 RSPH10BP0C881 870 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 CYP4A11Q02928 519 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 TARBP2Q15633 366 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 FAM26DQ5JW98 314 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 ARL6IP4Q66PJ3 421 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 TRMT1LQ7Z2T5 733 aaKnown RBP16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 NME8Q8N427 588 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 ERMNQ8TAM6 284 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 RGL1Q9NZL6 768 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 WRAP73Q9P2S5 460 aaPredicted RBP16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 STK24Q9Y6E0 443 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 SCN5AQ14524 2016 aa16.53■□□□□ 0.24
CDC42BPB-209ENST00000634889 SLITRK3O94933 977 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 CTTNQ14247 550 aaKnown RBP16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 HAUS3Q68CZ6 603 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 DTHD1Q6ZMT9 781 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 ANO5Q75V66 913 aa16.52■□□□□ 0.24
CDC42BPB-209ENST00000634889 C16orf59Q7L2K0 433 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms