RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 ERICH1Q86X53 443 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 SCG3Q8WXD2 468 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 FEM1BQ9UK73 627 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 FAF1Q9UNN5 650 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 GPATCH8Q9UKJ3 1502 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 CCDC151A5D8V7 595 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 RSPH10B2B2RC85 870 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 RSPH10BP0C881 870 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 HLA-DPA1P20036 260 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 RAP1GDS1P52306 607 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 CACNB1Q02641 598 aaPredicted RBP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 ALCAMQ13740 583 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 SNRNP48Q6IEG0 339 aaKnown RBP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 HAUS6Q7Z4H7 955 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 SYNE4Q8N205 404 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 OR6J1Q8NGC5 347 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 PIGSQ96S52 555 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 COA1Q9GZY4 146 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 THEGQ9P2T0 379 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 MLH3Q9UHC1 1453 aa6.9□□□□□ -1.31
SRGAP1-207ENST00000631006 KRT87PA6NCN2 255 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 NCF2P19878 526 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 TRAPPC10P48553 1259 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ADKP55263 362 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 PHKG1Q16816 387 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF568Q3ZCX4 644 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 HOXA13P31271 388 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GRIK1P39086 918 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SYMPKQ92797 1274 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SPATA33Q96N06 139 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 PARVGQ9HBI0 331 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 C6orf203Q9P0P8 240 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 G3BP2Q9UN86 482 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SPDYE5A6NIY4 337 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MAP3K13O43283 966 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 COPB2P35606 906 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SPDYE7PQ495Y7 208 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 FAM117BQ6P1L5 589 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 RRM2BQ7LG56 351 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ADCK2Q7Z695 626 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 OTULINQ96BN8 352 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 CNOT6LQ96LI5 555 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SPON2Q9BUD6 331 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF302Q9NR11 478 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 TJP2Q9UDY2 1190 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 LRRD1A4D1F6 860 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GOLGA8KD6RF30 607 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MT-ND3P03897 115 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 PTGDRQ13258 359 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 TMEM259Q4ZIN3 620 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ARHGAP15Q53QZ3 475 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 RHPN2Q8IUC4 686 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 FAF2Q96CS3 445 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 RAVER2Q9HCJ3 691 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 BAIAP2L1Q9UHR4 511 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ZKSCAN5Q9Y2L8 839 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 PRRG1O14668 218 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ECE2O60344 883 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 TADA2AO75478 443 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MAP4P27816 1152 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 EIF4A1P60842 406 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GRAPQ13588 217 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GRAPLQ8TC17 118 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MAGOHBQ96A72 148 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 STN1Q9H668 368 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ANLNQ9NQW6 1124 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GOLGA8IPA6NC78 632 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GOLGA8JA6NMD2 632 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MOCS2O96007 188 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 IL6STP40189 918 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 KCNQ4P56696 695 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 DYNLL1P63167 89 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SREBF2Q12772 1141 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MAPK6Q16659 721 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 PDXDC1Q6P996 788 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 SPATA2LQ8IUW3 424 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 CUEDC2Q9H467 287 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 GCNT4Q9P109 453 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 JAK2O60674 1132 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ECEL1O95672 775 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 U2AF2P26368 475 aaKnown RBP eCLIP6.89□□□□□ -1.314e-7■■■■■ 30.7
SRGAP1-207ENST00000631006 ZNF75DP51815 510 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 RASSF7Q02833 373 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MTMR1Q13613 665 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF699Q32M78 642 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 AARS2Q5JTZ9 985 aaKnown RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MFSD4BQ5TF39 518 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 OOSP2Q86WS3 158 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 IFNLR1Q8IU57 520 aaPredicted RBP6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 BTN2A2Q8WVV5 523 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 MTBPQ96DY7 904 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 CBX8Q9HC52 389 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 L3MBTL1Q9Y468 752 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 DAAM1Q9Y4D1 1078 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 NUP160Q12769 1436 aa6.89□□□□□ -1.31
SRGAP1-207ENST00000631006 POLR3AO14802 1390 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF197O14709 1029 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ZSCAN9O15535 394 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms