RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 DDX25Q9UHL0 483 aaKnown RBP9.39□□□□□ -0.91
CHD2-209ENST00000627185 PCDHA12Q9UN75 941 aa9.39□□□□□ -0.91
CHD2-209ENST00000627185 TRAF3IP3Q9Y228 551 aa9.39□□□□□ -0.91
CHD2-209ENST00000627185 PCDHB11Q9Y5F2 797 aa9.39□□□□□ -0.91
CHD2-209ENST00000627185 SAR1BQ9Y6B6 198 aa9.39□□□□□ -0.91
CHD2-209ENST00000627185 A0A0U1RQG5 324 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 B4DLN1 442 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 CES2O00748 559 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 SLC37A4O43826 429 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 USO1O60763 962 aaKnown RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 PPP1R11O60927 126 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 FSHRP23945 695 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 RPA1P27694 616 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 CYP2C19P33261 490 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 SREBF1P36956 1147 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 TXKP42681 527 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 MTIF2P46199 727 aaKnown RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 AARSP49588 968 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD2-209ENST00000627185 SPIRE1Q08AE8 756 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 KIF5AQ12840 1032 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 MAP9Q49MG5 647 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 FAM26FQ5R3K3 315 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 FKBP1CQ5VVH2 108 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 DPP8Q6V1X1 898 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 KRT27Q7Z3Y8 459 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 TRIM59Q8IWR1 403 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 CCDC65Q8IXS2 484 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 MMGT1Q8N4V1 131 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 EIF1ADQ8N9N8 165 aaKnown RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 SNX29Q8TEQ0 813 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 EXOC4Q96A65 974 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 SLF1Q9BQI6 1058 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 POLR3CQ9BUI4 534 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 IRX2Q9BZI1 471 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 UBA5Q9GZZ9 404 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 TMX4Q9H1E5 349 aaPredicted RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 VPS33BQ9H267 617 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 MED4Q9NPJ6 270 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 LUC7LQ9NQ29 371 aaKnown RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 PLCB1Q9NQ66 1216 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 CEP72Q9P209 647 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 JAG2Q9Y219 1238 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 COL4A3BPQ9Y5P4 624 aa9.38□□□□□ -0.91
CHD2-209ENST00000627185 BAZ2BQ9UIF8 2168 aaKnown RBP9.38□□□□□ -0.91
CHD2-209ENST00000627185 ANKRD31Q8N7Z5 1873 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 GTPBP10A4D1E9 387 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 ERVH48-1M5A8F1 160 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 MEIS2O14770 477 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 TACC1O75410 805 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 EIF3JO75822 258 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 GFPT2O94808 682 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 TDP2O95551 362 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 FCER1AP12319 257 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 TCP1P17987 556 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 TNFRSF8P28908 595 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 CRKP46108 304 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 USP14P54578 494 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 GHRHRQ02643 423 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 FOXC1Q12948 553 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 SPA17Q15506 151 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 GLE1Q53GS7 698 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 CCDC122Q5T0U0 273 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 EPM2AIP1Q7L775 607 aaPredicted RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 FMNL3Q8IVF7 1028 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 SAMD3Q8N6K7 520 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 ERMNQ8TAM6 284 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 ETNPPLQ8TBG4 499 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.37□□□□□ -0.914e-7■■■■■ 58.1
CHD2-209ENST00000627185 JAKMIP2Q96AA8 810 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 CCDC42Q96M95 316 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 KCTD10Q9H3F6 313 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 AGPAT5Q9NUQ2 364 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 KCND2Q9NZV8 630 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 HERC5Q9UII4 1024 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 RABGAP1Q9Y3P9 1069 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 BZW2Q9Y6E2 419 aaKnown RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 RGPD3A6NKT7 1758 aaPredicted RBP9.37□□□□□ -0.91
CHD2-209ENST00000627185 RGPD4Q7Z3J3 1758 aa9.37□□□□□ -0.91
CHD2-209ENST00000627185 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 PDXKO00764 312 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SLC16A3O15427 465 aaKnown RBP9.36□□□□□ -0.91
CHD2-209ENST00000627185 GDF9O60383 454 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 RPS6KA5O75582 802 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SASH3O75995 380 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SLC12A3P55017 1021 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
CHD2-209ENST00000627185 COASYQ13057 564 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 MYBPC2Q14324 1141 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SMC1AQ14683 1233 aaKnown RBP9.36□□□□□ -0.91
CHD2-209ENST00000627185 PTPN21Q16825 1174 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 QRICH1Q2TAL8 776 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 OXLD1Q5BKU9 147 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 FRMD5Q7Z6J6 570 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SIAH1Q8IUQ4 282 aa9.36□□□□□ -0.91
CHD2-209ENST00000627185 SYT2Q8N9I0 419 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms