RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 ZMYND15Q9H091 742 aa21.68■■□□□ 1.06
CHRNA4-209ENST00000627000 OLFML3Q9NRN5 406 aa21.68■■□□□ 1.06
CHRNA4-209ENST00000627000 WDR90Q96KV7 1748 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 ASTN1O14525 1302 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 CETN3O15182 167 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 GAP43P17677 238 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 ARHGAP25P42331 645 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 BMT2Q1RMZ1 405 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 PNMA2Q9UL42 364 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 SAMM50Q9Y512 469 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 GNA14O95837 355 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 ZC2HC1CQ53FD0 456 aaPredicted RBP21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 GPIHBP1Q8IV16 184 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 TMOD4Q9NZQ9 345 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 RNF181Q9P0P0 153 aa21.67■■□□□ 1.06
CHRNA4-209ENST00000627000 MYH11P35749 1972 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 TESPA1A2RU30 521 aaPredicted RBP21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 ADM5C9JUS6 153 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 KSR1Q8IVT5 923 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 ANKRD7Q92527 254 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 FIZ1Q96SL8 496 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 PARVGQ9HBI0 331 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 SNCAIPQ9Y6H5 919 aa21.66■■□□□ 1.06
CHRNA4-209ENST00000627000 ARHGEF35A5YM69 484 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 PDXKO00764 312 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 P4HBP07237 508 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 VGLL4Q14135 290 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 ARHGAP29Q52LW3 1261 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 ZNF397Q8NF99 534 aaPredicted RBP21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 NEK9Q8TD19 979 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 CNKSR2Q8WXI2 1034 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 ERO1AQ96HE7 468 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 ZNHIT6Q9NWK9 470 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 TFR2Q9UP52 801 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 LOXHD1Q8IVV2 1947 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 ZMYM2Q9UBW7 1377 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 CLIC2O15247 247 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 HERVK_113P62684 666 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 NHEJ1Q9H9Q4 299 aaPredicted RBP21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 TYW1Q9NV66 732 aaKnown RBP21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 TRIM10Q9UDY6 481 aa21.65■■□□□ 1.06
CHRNA4-209ENST00000627000 SPDYE16A6NNV3 312 aaPredicted RBP21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 TGFB1I1O43294 461 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 CALUO43852 315 aaPredicted RBP21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 PLEKP08567 350 aaPredicted RBP21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 OAZ1P54368 228 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 ZNF569Q5MCW4 686 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 MAEAQ7L5Y9 396 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 CRACR2AQ9BSW2 395 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 ZSWIM4Q9H7M6 989 aa21.64■■□□□ 1.06
CHRNA4-209ENST00000627000 KIF5CO60282 957 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 CASP4P49662 377 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 ZNF131P52739 623 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 APBA1Q02410 837 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 MAPK7Q13164 816 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 PLS1Q14651 629 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 UGCGQ16739 394 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 DAW1Q8N136 415 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 NEK11Q8NG66 645 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 BAP1Q92560 729 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 IQCDQ96DY2 449 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 SH2D3AQ9BRG2 576 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 ADARB2Q9NS39 739 aaKnown RBP21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 TBC1D22BQ9NU19 505 aa21.64■■□□□ 1.05
CHRNA4-209ENST00000627000 TMEM150BA6NC51 233 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 LRRC53A6NM62 1247 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 PEX10O60683 326 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 HIP1RO75146 1068 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 AKAP3O75969 853 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 CCNE2O96020 404 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 NR3C1P04150 777 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 NR3C2P08235 984 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 PADI6Q6TGC4 694 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 RRAGAQ7L523 313 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 ODF2LQ9ULJ1 636 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 PLAGL2Q9UPG8 496 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 NOL4O94818 638 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 GUCY2CP25092 1073 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 KCNH2Q12809 1159 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 ODR4Q5SWX8 454 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 ZNF720Q7Z2F6 126 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 TRMT1LQ7Z2T5 733 aaKnown RBP21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 VSIG10LQ86VR7 867 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 TEX13BQ9BXU2 312 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 KCND2Q9NZV8 630 aa21.63■■□□□ 1.05
CHRNA4-209ENST00000627000 OTOFQ9HC10 1997 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 PTPRFP10586 1907 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 KIAA1217Q5T5P2 1943 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 EIF3DO15371 548 aaKnown RBP eCLIP21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 HNRNPH3P31942 346 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 QARSP47897 775 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 MAP3K9P80192 1104 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 TREML2Q5T2D2 321 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 FAM178BQ8IXR5 827 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 SLC35F6Q8N357 371 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 LSM14BQ9BX40 385 aaKnown RBP21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 NLRC4Q9NPP4 1024 aa21.62■■□□□ 1.05
CHRNA4-209ENST00000627000 ARHGAP20Q9P2F6 1191 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms