RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 IGLV3-22A0A075B6J6 115 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 IGKV6D-21A0A0A0MT36 114 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 IPO5O00410 1097 aaKnown RBP14.29□□□□□ -0.12
PNKP-217ENST00000625216 MMP1P03956 469 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 CA3P07451 260 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 INSRRP14616 1297 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 MARK3P27448 753 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 USP11P51784 963 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 TRIM29Q14134 588 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 FAM160B1Q5W0V3 765 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 GALNT17Q6IS24 598 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 ABHD15Q6UXT9 468 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
PNKP-217ENST00000625216 APBB2Q92870 758 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 GBP4Q96PP9 640 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 RAD9AQ99638 391 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 ZNF577Q9BSK1 485 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 ZBED2Q9BTP6 218 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 TUBE1Q9UJT0 475 aa14.29□□□□□ -0.12
PNKP-217ENST00000625216 DHX15O43143 795 aaKnown RBP14.28□□□□□ -0.12
PNKP-217ENST00000625216 GJB5O95377 273 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 AMHP03971 560 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 MCM4P33991 863 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 PLCB4Q15147 1175 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 NPY5RQ15761 445 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 CHD9Q3L8U1 2897 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 MARCH8Q5T0T0 291 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 MCTP1Q6DN14 999 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 MIS18BP1Q6P0N0 1132 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 PHF20Q9BVI0 1012 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 TCEAL9Q9UHQ7 104 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 PCDHA4Q9UN74 947 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
PNKP-217ENST00000625216 POTEB3A0JP26 581 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 CCNE2O96020 404 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 CTSHP09668 335 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 DEFB103AP81534 67 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 KRT76Q01546 638 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 TAP1Q03518 808 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 DNM1Q05193 864 aaKnown RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 MKRN4PQ13434 485 aaPredicted RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 ADGRE1Q14246 886 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 TCTN1Q2MV58 587 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 PRR16Q569H4 304 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 ZNF746Q6NUN9 644 aaPredicted RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 POTEBQ6S5H4 581 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 SMAP1Q8IYB5 467 aaPredicted RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 ZSCAN16Q9H4T2 348 aaPredicted RBP14.27□□□□□ -0.13
PNKP-217ENST00000625216 PCDHA2Q9Y5H9 948 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 SQORQ9Y6N5 450 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 TANC1Q9C0D5 1861 aa14.27□□□□□ -0.13
PNKP-217ENST00000625216 SCN5AQ14524 2016 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 TRIP12Q14669 1992 aaPredicted RBP14.26□□□□□ -0.13
PNKP-217ENST00000625216 BACH1O14867 736 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 HBP1O60381 514 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 CHRNA1P02708 482 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 XBP1P17861 261 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 POU3F3P20264 500 aaPredicted RBP14.26□□□□□ -0.13
PNKP-217ENST00000625216 IGFBP4P22692 258 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 IGBP1P78318 339 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 IER5Q5VY09 327 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 RUFY4Q6ZNE9 571 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 DIS3L2Q8IYB7 885 aaKnown RBP14.26□□□□□ -0.13
PNKP-217ENST00000625216 BLIDQ8IZY5 108 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 NME8Q8N427 588 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 DAGLBQ8NCG7 672 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 RASGRP4Q8TDF6 673 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 OXER1Q8TDS5 423 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 ATP8B4Q8TF62 1192 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 DNAJB3Q8WWF6 145 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
PNKP-217ENST00000625216 ZNF302Q9NR11 478 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 INSL6Q9Y581 213 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 PCDHA10Q9Y5I2 948 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 ATP6V1DQ9Y5K8 247 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 TET1Q8NFU7 2136 aa14.26□□□□□ -0.13
PNKP-217ENST00000625216 SMIM35A0A1B0GVV1 85 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 BTBD18B2RXH4 712 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 DDX39AO00148 427 aaKnown RBP14.25□□□□□ -0.13
PNKP-217ENST00000625216 PSAPP07602 524 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 MGAT3Q09327 533 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 NR5A1Q13285 461 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 ZNF484Q5JVG2 852 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 PDXDC2PQ6P474 469 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.25□□□□□ -0.13
PNKP-217ENST00000625216 USP38Q8NB14 1042 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 TBCKQ8TEA7 893 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 TNFRSF25Q93038 417 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 LENG9Q96B70 501 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 RIT2Q99578 217 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 GDPD2Q9HCC8 539 aa14.25□□□□□ -0.13
PNKP-217ENST00000625216 MAFBQ9Y5Q3 323 aaPredicted RBP14.25□□□□□ -0.13
PNKP-217ENST00000625216 COL1A2P08123 1366 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 M0QZ92 97 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 M0R2N6 131 aa14.24□□□□□ -0.13
PNKP-217ENST00000625216 DLL1O00548 723 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms