RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TXLNGYQ9BZA5 131 aa15.39■□□□□ 0.05
LDB3-209ENST00000623056 SLC24A3Q9HC58 644 aa15.39■□□□□ 0.05
LDB3-209ENST00000623056 UTP11Q9Y3A2 253 aaKnown RBP15.39■□□□□ 0.05
LDB3-209ENST00000623056 KLRF2D3W0D1 207 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 PPP1R12AO14974 1030 aaPredicted RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 ASAP2O43150 1006 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 MMEP08473 750 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 SF3A3Q12874 501 aaKnown RBP eCLIP15.38■□□□□ 0.05
LDB3-209ENST00000623056 ORC2Q13416 577 aaPredicted RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 ITIH4Q14624 930 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TMEM266Q2M3C6 531 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 LRCH2Q5VUJ6 765 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 PIGWQ7Z7B1 504 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 MAB21L3Q8N8X9 362 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 SNX29Q8TEQ0 813 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 FGFBP2Q9BYJ0 223 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 LRRC27Q9C0I9 530 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TMEM260Q9NX78 707 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 BIN2Q9UBW5 565 aaPredicted RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 NAGPAQ9UK23 515 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 NTSR2O95665 410 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 GNA14O95837 355 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 CLTAP09496 248 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 MARSP56192 900 aaKnown RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 MYO1EQ12965 1108 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 RIPK1Q13546 671 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TMEM119Q4V9L6 283 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 FAM26FQ5R3K3 315 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 HOOK3Q86VS8 718 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 ATP8B4Q8TF62 1192 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 NSMCE1Q8WV22 266 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 ATXN2LQ8WWM7 1075 aaKnown RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 DNAJC19Q96DA6 116 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TMEM47Q9BQJ4 181 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 LZTS2Q9BRK4 669 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TRIM51Q9BSJ1 452 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 TRIM31Q9BZY9 425 aa15.38■□□□□ 0.05
LDB3-209ENST00000623056 THRAP3Q9Y2W1 955 aaKnown RBP15.38■□□□□ 0.05
LDB3-209ENST00000623056 SLC37A4O43826 429 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 SHBGP04278 402 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 TSPY3P0CV98 308 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 TSPY8P0CW00 308 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 ACTN1P12814 892 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 PRDX5P30044 214 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 EPS15P42566 896 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 FAM98CQ17RN3 349 aaKnown RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 SPDYCQ5MJ68 293 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 C12orf60Q5U649 245 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 KRT79Q5XKE5 535 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 ALKBH5Q6P6C2 394 aaKnown RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 SLFN11Q7Z7L1 901 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 TBC1D1Q86TI0 1168 aaPredicted RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 PNMA8AQ86V59 439 aaPredicted RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 NELFCDQ8IXH7 590 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 LRRC34Q8IZ02 419 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 REXO1Q8N1G1 1221 aaKnown RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 FMO2Q99518 471 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 SELENOSQ9BQE4 189 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 CDCA7Q9BWT1 371 aaPredicted RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 EPB41L4BQ9H329 900 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 MKNK2Q9HBH9 465 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 TBC1D7Q9P0N9 293 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 SUCLA2Q9P2R7 463 aaPredicted RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 STX8Q9UNK0 236 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 STXBP5LQ9Y2K9 1186 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 ATAD5Q96QE3 1844 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 MMP13P45452 471 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 POU5F1Q01860 360 aaKnown RBP15.37■□□□□ 0.05
LDB3-209ENST00000623056 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 SOGA3Q5TF21 947 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 ADAM7Q9H2U9 754 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 PANK4Q9NVE7 773 aa15.37■□□□□ 0.05
LDB3-209ENST00000623056 TDP2O95551 362 aa15.36■□□□□ 0.05
LDB3-209ENST00000623056 FAM133BQ5BKY9 247 aaKnown RBP15.36■□□□□ 0.05
LDB3-209ENST00000623056 THOC1Q96FV9 657 aaKnown RBP15.36■□□□□ 0.05
LDB3-209ENST00000623056 NGLY1Q96IV0 654 aa15.36■□□□□ 0.05
LDB3-209ENST00000623056 C15orf41Q9Y2V0 281 aa15.36■□□□□ 0.05
LDB3-209ENST00000623056 CFAP73A6NFT4 308 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 KLRK1P26718 216 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 KCNH2Q12809 1159 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 ECM1Q16610 540 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 DPY19L2P1Q6NXN4 242 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 NT5DC3Q86UY8 548 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 SPAG5Q96R06 1193 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 RAB34Q9BZG1 259 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 MTFR1LQ9H019 292 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 L3MBTL1Q9Y468 752 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 BZW2Q9Y6E2 419 aaKnown RBP15.35■□□□□ 0.05
LDB3-209ENST00000623056 KCNQ2O43526 872 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 SKAP2O75563 359 aaPredicted RBP15.35■□□□□ 0.05
LDB3-209ENST00000623056 ANP32DO95626 131 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 NUDT17P0C025 328 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 PDIA5Q14554 519 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 NAIF1Q69YI7 327 aaPredicted RBP15.35■□□□□ 0.05
LDB3-209ENST00000623056 TRPM8Q7Z2W7 1104 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 FBXO33Q7Z6M2 555 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 DAAM2Q86T65 1068 aa15.35■□□□□ 0.05
LDB3-209ENST00000623056 PGM2Q96G03 612 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms