RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 RASSF2P50749 326 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 TPD52P55327 224 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-215ENST00000622697 DYDC2Q96IM9 177 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 PVALEFA0A1B0GWK0 134 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 DPYDQ12882 1025 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 SCARA5Q6ZMJ2 495 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 EFCAB13Q8IY85 973 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ARHGAP24Q8N264 748 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 NEK9Q8TD19 979 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ZMYND12Q9H0C1 365 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 TRPC5Q9UL62 973 aaPredicted RBP17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ORC4O43929 436 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 SUN1O94901 812 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 SNCBQ16143 134 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 TMEM179Q6ZVK1 233 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 PIK3C2BO00750 1634 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 NME8Q8N427 588 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ENGASEQ8NFI3 743 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ATP2A3Q93084 1043 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 ZNF341Q9BYN7 854 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 AGPAT5Q9NUQ2 364 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 TUBE1Q9UJT0 475 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 PTPRUQ92729 1446 aa17.46■□□□□ 0.39
GABRB3-215ENST00000622697 HIP1RO75146 1068 aa17.46■□□□□ 0.38
GABRB3-215ENST00000622697 QRICH1Q2TAL8 776 aa17.46■□□□□ 0.38
GABRB3-215ENST00000622697 ZNF746Q6NUN9 644 aaPredicted RBP17.46■□□□□ 0.38
GABRB3-215ENST00000622697 RAD9BQ6WBX8 426 aa17.46■□□□□ 0.38
GABRB3-215ENST00000622697 DDX47Q9H0S4 455 aaKnown RBP17.46■□□□□ 0.38
GABRB3-215ENST00000622697 CEMIPQ8WUJ3 1361 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 AP5Z1O43299 807 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 BAG2O95816 211 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 TC2NQ8N9U0 490 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 BBOF1Q8ND07 529 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 CAPN9O14815 690 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 RASGRF2O14827 1237 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 MUM1Q2TAK8 710 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 CCDC38Q502W7 563 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 FOXP4Q8IVH2 680 aaPredicted RBP17.45■□□□□ 0.38
GABRB3-215ENST00000622697 REREQ9P2R6 1566 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 HESX1Q9UBX0 185 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 CCT6BQ92526 530 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 THOC1Q96FV9 657 aaKnown RBP17.45■□□□□ 0.38
GABRB3-215ENST00000622697 WDR91A4D1P6 747 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 SEPT12Q8IYM1 358 aa17.45■□□□□ 0.38
GABRB3-215ENST00000622697 IL9RQ01113 521 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 NR1I3Q14994 352 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 MAGED2Q9UNF1 606 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 TFR2Q9UP52 801 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 ZNF394Q53GI3 561 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 RAB3IPQ96QF0 476 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 ADPGKQ9BRR6 497 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 EFCC1Q9HA90 598 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 ANO9A1A5B4 782 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 NPR1P16066 1061 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 USP14P54578 494 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 HEMGNQ9BXL5 484 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 CAPN11Q9UMQ6 739 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 ABCB11O95342 1321 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 INO80Q9ULG1 1556 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 C21orf2O43822 256 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 KNOP1Q1ED39 458 aaKnown RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 PROM2Q8N271 834 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 AP3B2Q13367 1082 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 CALN1Q9BXU9 219 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 TRIM9Q9C026 710 aa17.44■□□□□ 0.38
GABRB3-215ENST00000622697 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
GABRB3-215ENST00000622697 LRRD1A4D1F6 860 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 E2F4Q16254 413 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 EIF3CLB5ME19 914 aaKnown RBP17.43■□□□□ 0.38
GABRB3-215ENST00000622697 MYO1CO00159 1063 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 BASP1P80723 227 aaKnown RBP17.43■□□□□ 0.38
GABRB3-215ENST00000622697 PASD1Q8IV76 773 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 EIF3CQ99613 913 aaKnown RBP17.43■□□□□ 0.38
GABRB3-215ENST00000622697 INHBAP08476 426 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 MARK3P27448 753 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 FAM160B1Q5W0V3 765 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 DNAJC24Q6P3W2 148 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 RPUSD2Q8IZ73 545 aaKnown RBP17.43■□□□□ 0.38
GABRB3-215ENST00000622697 DCAF4Q8WV16 495 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 MS4A14Q96JA4 679 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 TRIM49P0CI25 452 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 TRIM49CP0CI26 452 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 KLK7P49862 253 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 STK4Q13043 487 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 NXNQ6DKJ4 435 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 MIS18BP1Q6P0N0 1132 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
GABRB3-215ENST00000622697 LIMA1Q9UHB6 759 aaKnown RBP17.43■□□□□ 0.38
GABRB3-215ENST00000622697 SRGAP2CP0DJJ0 459 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 DIP2CQ9Y2E4 1556 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 GUF1Q8N442 669 aaKnown RBP17.42■□□□□ 0.38
GABRB3-215ENST00000622697 SMARCAL1Q9NZC9 954 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 F5H6K3 240 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 SLC16A4O15374 487 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 KLRC3Q07444 240 aa17.42■□□□□ 0.38
GABRB3-215ENST00000622697 CUL1Q13616 776 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms