RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 TRPV2Q9Y5S1 764 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 CNTNAP5Q8WYK1 1306 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 MYO15AQ9UKN7 3530 aa12.55□□□□□ -0.4
LINC00963-214ENST00000622680 SCG2P13521 617 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 SMARCA1P28370 1054 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 MCM5P33992 734 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 NDUFV1P49821 464 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 GNAQP50148 359 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 PAK2Q13177 524 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 PLCB4Q15147 1175 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 TMTC3Q6ZXV5 915 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 CMTR2Q8IYT2 770 aaKnown RBP12.54□□□□□ -0.4
LINC00963-214ENST00000622680 CRIPAKQ8N1N5 446 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 KLHL23Q8NBE8 558 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 FBXL18Q96ME1 805 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 LZTS2Q9BRK4 669 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 PLVAPQ9BX97 442 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 JADE2Q9NQC1 790 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 PADI3Q9ULW8 664 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 IGSF9BQ9UPX0 1349 aa12.54□□□□□ -0.4
LINC00963-214ENST00000622680 M0QZ92 97 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 SLC27A2O14975 620 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 NCK2O43639 380 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 GLP2RO95838 553 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 MRE11P49959 708 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 ACTR2P61160 394 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 NHLH1Q02575 133 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 ITGB3BPQ13352 177 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-214ENST00000622680 ADAM15Q13444 863 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 TYW1BQ6NUM6 668 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 RNF135Q8IUD6 432 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 NPAS4Q8IUM7 802 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 P2RX5Q93086 422 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 TMEM87BQ96K49 555 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 LSG1Q9H089 658 aaKnown RBP12.53□□□□□ -0.4
LINC00963-214ENST00000622680 AZI2Q9H6S1 392 aa12.53□□□□□ -0.4
LINC00963-214ENST00000622680 BARX2Q9UMQ3 279 aaPredicted RBP12.53□□□□□ -0.4
LINC00963-214ENST00000622680 RRN3P2A6NIE6 340 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 DDX39AO00148 427 aaKnown RBP12.52□□□□□ -0.41
LINC00963-214ENST00000622680 STXBP3O00186 592 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 MGEA5O60502 916 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 CALM1P0DP23 149 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 CALM2P0DP24 149 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 CALM3P0DP25 149 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 ARP10275 920 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 LIFRP42702 1097 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 NRIP1P48552 1158 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
LINC00963-214ENST00000622680 IER5Q5VY09 327 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 RBM23Q86U06 439 aaKnown RBP12.52□□□□□ -0.41
LINC00963-214ENST00000622680 SPPL3Q8TCT6 385 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 MSLNLQ96KJ4 702 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 PPP1R16BQ96T49 567 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 POP1Q99575 1024 aaKnown RBP12.52□□□□□ -0.41
LINC00963-214ENST00000622680 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 MTA3Q9BTC8 594 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 CELF4Q9BZC1 486 aaKnown RBP12.52□□□□□ -0.41
LINC00963-214ENST00000622680 CLEC1BQ9P126 229 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 SLC12A7Q9Y666 1083 aa12.52□□□□□ -0.41
LINC00963-214ENST00000622680 MTCL1Q9Y4B5 1905 aaKnown RBP12.51□□□□□ -0.41
LINC00963-214ENST00000622680 PPFIA3O75145 1194 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 CCNE2O96020 404 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 STAT5BP51692 787 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 NAPAP54920 295 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 NFX1Q12986 1120 aaKnown RBP12.51□□□□□ -0.41
LINC00963-214ENST00000622680 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-214ENST00000622680 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 MTHFD1LQ6UB35 978 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 FANCBQ8NB91 859 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 SMRP1Q8NCR6 262 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 POF1BQ8WVV4 589 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 TMEM40Q8WWA1 233 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 SDF4Q9BRK5 362 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
LINC00963-214ENST00000622680 TMEM260Q9NX78 707 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 LRFN2Q9ULH4 789 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 PCDHA2Q9Y5H9 948 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 NFASCO94856 1347 aa12.51□□□□□ -0.41
LINC00963-214ENST00000622680 ZFHX2Q9C0A1 2572 aaPredicted RBP12.51□□□□□ -0.41
LINC00963-214ENST00000622680 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 MAFGO15525 162 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 EYA4O95677 639 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 RPLP2P05387 115 aaKnown RBP12.5□□□□□ -0.41
LINC00963-214ENST00000622680 STAG3L1P0CL83 205 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 KRT76Q01546 638 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 APOA5Q6Q788 366 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 CCDC60Q8IWA6 550 aaPredicted RBP12.5□□□□□ -0.41
LINC00963-214ENST00000622680 TMTC2Q8N394 836 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 EFHBQ8N7U6 833 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 PPP2R3CQ969Q6 453 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 PHOX2BQ99453 314 aa12.5□□□□□ -0.41
LINC00963-214ENST00000622680 ESYT1Q9BSJ8 1104 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms