RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PXYLP1Q8TE99 480 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 LENG1Q96BZ8 264 aaPredicted RBP19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 AZI2Q9H6S1 392 aa19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 GNEQ9Y223 722 aaKnown RBP19.88■□□□□ 0.77
PTCHD3-202ENST00000622555 DYNC1LI2O43237 492 aaPredicted RBP19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 ZNF862O60290 1169 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 SMC2O95347 1197 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 PRKAR2AP13861 404 aaKnown RBP19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 YWHABP31946 246 aaKnown RBP19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 SLC12A3P55017 1021 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 DPYDQ12882 1025 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 CUL4BQ13620 913 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 TLK2Q86UE8 772 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 GPBP1Q86WP2 473 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 PCYT2Q99447 389 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 PCDHA5Q9Y5H7 936 aa19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 MAFBQ9Y5Q3 323 aaPredicted RBP19.87■□□□□ 0.77
PTCHD3-202ENST00000622555 MYL1P05976 194 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 STAT5BP51692 787 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 PRKCEQ02156 737 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 SYT2Q8N9I0 419 aaPredicted RBP19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 GLG1Q92896 1179 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 SMARCE1Q969G3 411 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 CCDC43Q96MW1 224 aaKnown RBP19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 ARID2Q68CP9 1835 aa19.86■□□□□ 0.77
PTCHD3-202ENST00000622555 ARHGEF35A5YM69 484 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 MYMKA6NI61 221 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 LGR5O75473 907 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 SASS6Q6UVJ0 657 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 SLAIN1Q8ND83 568 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 AFAP1L1Q8TED9 768 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 C7orf25Q9BPX7 421 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 TRIM9Q9C026 710 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 AP5M1Q9H0R1 490 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 DBR1Q9UK59 544 aaKnown RBP19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 PTCH2Q9Y6C5 1203 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 EMSYQ7Z589 1322 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 ZNF445P59923 1031 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 ASIC1P78348 528 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 TRIM50Q86XT4 487 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 BMP2KQ9NSY1 1161 aaPredicted RBP19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 ANKEF1Q9NU02 776 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 TUBE1Q9UJT0 475 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 Q9Y3F1 56 aa19.85■□□□□ 0.77
PTCHD3-202ENST00000622555 CEP350Q5VT06 3117 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 TMEM150BA6NC51 233 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 BIN1O00499 593 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 SEPT4O43236 478 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 KRT18P05783 430 aaKnown RBP19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 MMP3P08254 477 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 CYP11B2P19099 503 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 CCND3P30281 292 aaPredicted RBP19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 GRK4P32298 578 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 MRE11P49959 708 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 XKR3Q5GH77 459 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 PLA2G4FQ68DD2 849 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 OTUD6AQ7L8S5 288 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 DYMQ7RTS9 669 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 GAS2L3Q86XJ1 694 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 DDX12PQ92771 950 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 SMARCAD1Q9H4L7 1026 aa19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 SEPT9Q9UHD8 586 aaPredicted RBP19.84■□□□□ 0.77
PTCHD3-202ENST00000622555 DUSP11O75319 330 aaKnown RBP19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 PPFIA4O75335 1185 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 STBD1O95210 358 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 OATP04181 439 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 RPN1P04843 607 aaKnown RBP19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 LGALS2P05162 132 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 ATP4AP20648 1035 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 RARRES1P49788 294 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 DGKDQ16760 1214 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 XKR9Q5GH70 373 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 ANO5Q75V66 913 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 PLPPR4Q7Z2D5 763 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 SPATA20Q8TB22 786 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 RUSC1Q9BVN2 902 aa19.83■□□□□ 0.77
PTCHD3-202ENST00000622555 INHAP05111 366 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 CCDC192P0DO97 292 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 MARK3P27448 753 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 SARSP49591 514 aaKnown RBP19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 MAP3K21Q5TCX8 1036 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 NT5DC1Q5TFE4 455 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 RINT1Q6NUQ1 792 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 LRSAM1Q6UWE0 723 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 GSDMAQ96QA5 445 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 SH2D3AQ9BRG2 576 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 MAN1B1Q9UKM7 699 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 MYH11P35749 1972 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 NPHP3-ACAD11A0A0J9YXS1 232 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 A6NJR5 290 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 ZNF286BP0CG31 522 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 RARBP10826 455 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 HOXD8P13378 290 aaPredicted RBP19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 NPEPPSP55786 919 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 TYRO3Q06418 890 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 RAD51AP2Q09MP3 1159 aa19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 BRDTQ58F21 947 aaPredicted RBP19.82■□□□□ 0.76
PTCHD3-202ENST00000622555 ARSHQ5FYA8 562 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms