RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 IPO7O95373 1038 aaKnown RBP19.28■□□□□ 0.68
FAM3A-222ENST00000621967 FGFR1OPO95684 399 aaKnown RBP19.28■□□□□ 0.68
FAM3A-222ENST00000621967 VAV2P52735 878 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 C1QTNF8P60827 252 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 SNAP25P60880 206 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 KRT79Q5XKE5 535 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 LRRC55Q6ZSA7 311 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 MTMR8Q96EF0 704 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 NUDT12Q9BQG2 462 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 NDST4Q9H3R1 872 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 HDAC6Q9UBN7 1215 aa19.28■□□□□ 0.68
FAM3A-222ENST00000621967 CCDC66A2RUB6 948 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 SPDYE16A6NNV3 312 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-222ENST00000621967 ENC1O14682 589 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 ZBED4O75132 1171 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 FDX1P10109 184 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 KCNK18Q7Z418 384 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 SMCR8Q8TEV9 937 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-222ENST00000621967 RPGRIP1Q96KN7 1286 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 PCMTD1Q96MG8 357 aaPredicted RBP19.27■□□□□ 0.68
FAM3A-222ENST00000621967 PTPN18Q99952 460 aa19.27■□□□□ 0.68
FAM3A-222ENST00000621967 RANBP17Q9H2T7 1088 aaKnown RBP19.27■□□□□ 0.68
FAM3A-222ENST00000621967 ZCCHC17Q9NP64 241 aaKnown RBP19.27■□□□□ 0.68
FAM3A-222ENST00000621967 ZNF263O14978 683 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 LCA5LO95447 670 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 QRICH1Q2TAL8 776 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 CCDC174Q6PII3 467 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 DYMQ7RTS9 669 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 HAS1Q92839 578 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 P2RX7Q99572 595 aaKnown RBP19.27■□□□□ 0.67
FAM3A-222ENST00000621967 TSGA10Q9BZW7 698 aa19.27■□□□□ 0.67
FAM3A-222ENST00000621967 RLFQ13129 1914 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 VWA5AO00534 786 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 AOC2O75106 756 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 HSPA6P17066 643 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 HYIQ5T013 277 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 DDX12PQ92771 950 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 CUL5Q93034 780 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 ZIC5Q96T25 663 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 PARK7Q99497 189 aaKnown RBP19.26■□□□□ 0.67
FAM3A-222ENST00000621967 SLC38A10Q9HBR0 1119 aa19.26■□□□□ 0.67
FAM3A-222ENST00000621967 IGF2BP3O00425 579 aaKnown RBP eCLIP19.25■□□□□ 0.67
FAM3A-222ENST00000621967 CYP2C8P10632 490 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 GCFC2P16383 781 aaKnown RBP19.25■□□□□ 0.67
FAM3A-222ENST00000621967 CKAP4Q07065 602 aaKnown RBP19.25■□□□□ 0.67
FAM3A-222ENST00000621967 UBE2SQ16763 222 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 IFNL1Q8IU54 200 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 DNAJC19Q96DA6 116 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 MMS19Q96T76 1030 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 DDX25Q9UHL0 483 aaKnown RBP19.25■□□□□ 0.67
FAM3A-222ENST00000621967 EPHB6O15197 1021 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 GPS2Q13227 327 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 ECM1Q16610 540 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 ZCWPW2Q504Y3 356 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 CPXCR1Q8N123 301 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 CCDC42Q96M95 316 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 AMNQ9BXJ7 453 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 ARHGAP20Q9P2F6 1191 aa19.25■□□□□ 0.67
FAM3A-222ENST00000621967 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
FAM3A-222ENST00000621967 VEGFBP49765 207 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 MRPL12P52815 198 aaKnown RBP19.24■□□□□ 0.67
FAM3A-222ENST00000621967 CYP27A1Q02318 531 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 KIF5AQ12840 1032 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 USH1GQ495M9 461 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 FBXO11Q86XK2 927 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 EDEM3Q9BZQ6 932 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 SUGCTQ9HAC7 445 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 PDE11AQ9HCR9 933 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 PSD3Q9NYI0 1048 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 ADAMTS5Q9UNA0 930 aa19.24■□□□□ 0.67
FAM3A-222ENST00000621967 TARSL2A2RTX5 802 aaKnown RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 PLEKP08567 350 aaPredicted RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 IDEP14735 1019 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 TM4SF4P48230 202 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 TRAF1Q13077 416 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 CASP8Q14790 479 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 LBX2Q6XYB7 198 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 REM2Q8IYK8 340 aaPredicted RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 GTF3C2Q8WUA4 911 aaPredicted RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 SECISBP2LQ93073 1101 aaKnown RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 NAP1L4Q99733 375 aaKnown RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 PAGR1Q9BTK6 254 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 CCPG1Q9ULG6 757 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 DUSP10Q9Y6W6 482 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 A0A0G2JMZ2 1700 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 KDM3AQ9Y4C1 1321 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 ERICH4A6NGS2 130 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 SLC26A4O43511 780 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 SRGAP2O75044 1071 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 ICAM1P05362 532 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 COASYQ13057 564 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 PLS1Q14651 629 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 SPA17Q15506 151 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 TAF1CQ15572 869 aaPredicted RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 BAP1Q92560 729 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 EXOC4Q96A65 974 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 TSG101Q99816 390 aa19.23■□□□□ 0.67
FAM3A-222ENST00000621967 RAVER2Q9HCJ3 691 aaKnown RBP19.23■□□□□ 0.67
FAM3A-222ENST00000621967 PNMA2Q9UL42 364 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms