RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 RDXP35241 583 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 NOVP48745 357 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SARSP49591 514 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 RBM25P49756 843 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ATP8B2P98198 1209 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 PFKPQ01813 784 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 MGAT3Q09327 533 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 FZD5Q13467 585 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SIM2Q14190 667 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 UBE3CQ15386 1083 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 HSDL1Q3SXM5 330 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ODR4Q5SWX8 454 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 RARS2Q5T160 578 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SPOUT1Q5T280 376 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 LLGL2Q6P1M3 1020 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 PDXDC2PQ6P474 469 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 KCNT2Q6UVM3 1135 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SEPT14Q6ZU15 432 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SLC24A5Q71RS6 500 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 CHST3Q7LGC8 479 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF605Q86T29 641 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 CABP7Q86V35 215 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 VSIG10LQ86VR7 867 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 PROSER1Q86XN7 944 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 MCF2L2Q86YR7 1114 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SAMD3Q8N6K7 520 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 C12orf76Q8N812 135 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 COLGALT1Q8NBJ5 622 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 TMEM87AQ8NBN3 555 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ZCCHC14Q8WYQ9 949 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 TNPO1Q92973 898 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SPATA33Q96N06 139 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 HNRNPABQ99729 332 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SCNM1Q9BWG6 230 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 RANBP17Q9H2T7 1088 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ANTXR1Q9H6X2 564 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 CWH43Q9H720 699 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 AGO3Q9H9G7 860 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SCUBE2Q9NQ36 999 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 ENTPD7Q9NQZ7 604 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 PRMT8Q9NR22 394 aaPredicted RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 RGS18Q9NS28 235 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 C1orf112Q9NSG2 853 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 SETD4Q9NVD3 440 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 LRFN2Q9ULH4 789 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 CA14Q9ULX7 337 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 MRPS17Q9Y2R5 130 aaKnown RBP2.8□□□□□ -1.96
CPNE3-211ENST00000621526 PCDHGA5Q9Y5G8 931 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 MYO18BQ8IUG5 2567 aa2.8□□□□□ -1.96
CPNE3-211ENST00000621526 DOCK2Q92608 1830 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ASXL3Q9C0F0 2248 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 FRMPD2Q68DX3 1309 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ZBED9Q6R2W3 1325 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 WDR19Q8NEZ3 1342 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF532Q9HCE3 1301 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 KDM3AQ9Y4C1 1321 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CYP2D7A0A087X1C5 515 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CCDC163A0A0D9SF12 145 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MBLAC1A4D2B0 266 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 RRN3P2A6NIE6 340 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 C9IYK1 514 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 NFIBO00712 420 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MAN2B1O00754 1011 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 HOXA2O43364 376 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 N4BP1O75113 896 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 PAPSS2O95340 614 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 GNAI2P04899 355 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 NR3C2P08235 984 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CTSHP09668 335 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 WEE2P0C1S8 567 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CTSAP10619 480 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 HSPD1P10809 573 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 GHRP10912 638 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CXCL12P48061 93 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ALDH7A1P49419 539 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CCR3P51677 355 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 MLLT6P55198 1093 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 GPC5P78333 572 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ADCY1Q08828 1119 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 APOBRQ0VD83 1088 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 TROAPQ12815 778 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 IKQ13123 557 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SNW1Q13573 536 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 POLA2Q14181 598 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 PLA2G2CQ5R387 149 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 FAM102BQ5T8I3 360 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 DAB2IPQ5VWQ8 1189 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 PLPP4Q5VZY2 271 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 LARP1BQ659C4 914 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ELMSAN1Q6PJG2 1045 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 TMC5Q6UXY8 1006 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF852Q6ZMS4 543 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 DDX53Q86TM3 631 aaKnown RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 ZNF710Q8N1W2 664 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 LCORLQ8N3X6 602 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 C12orf50Q8NA57 414 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 CCER1Q8TC90 406 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SYTL5Q8TDW5 730 aaPredicted RBP2.79□□□□□ -1.96
CPNE3-211ENST00000621526 RSAD2Q8WXG1 361 aa2.79□□□□□ -1.96
CPNE3-211ENST00000621526 SSH1Q8WYL5 1049 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms