RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 GNAT1P11488 350 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 INSRRP14616 1297 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 ADCY7P51828 1080 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 ACTR2P61160 394 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 PLCB4Q15147 1175 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 TSGA10IPQ3SY00 556 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 EPC2Q52LR7 807 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 FBXO47Q5MNV8 452 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 KRI1Q8N9T8 703 aaKnown RBP13.08□□□□□ -0.32
CPNE3-210ENST00000621245 GIMAP8Q8ND71 665 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-210ENST00000621245 TMC2Q8TDI7 906 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 GLG1Q92896 1179 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 YME1L1Q96TA2 773 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 FAM49AQ9H0Q0 323 aaPredicted RBP13.08□□□□□ -0.32
CPNE3-210ENST00000621245 RC3H2Q9HBD1 1191 aaKnown RBP13.08□□□□□ -0.32
CPNE3-210ENST00000621245 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
CPNE3-210ENST00000621245 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 ERAP1Q9NZ08 941 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 INSL6Q9Y581 213 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 SNX14Q9Y5W7 946 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 CDY2AQ9Y6F7 541 aa13.08□□□□□ -0.32
CPNE3-210ENST00000621245 SMCO2A6NFE2 343 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 FAM86B1E9PN63 330 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 FAM86B2P0C5J1 330 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 SREBF1P36956 1147 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 RNF20Q5VTR2 975 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 JAKMIP3Q5VZ66 844 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 Q6ZUG5 572 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 RPAINQ86UA6 219 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 RASGRP4Q8TDF6 673 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 KCNB2Q92953 911 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 HLA-CQ95604 372 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 CDHR1Q96JP9 859 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 JAKMIP1Q96N16 626 aaKnown RBP13.07□□□□□ -0.32
CPNE3-210ENST00000621245 CD320Q9NPF0 282 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 SLC9A2Q9UBY0 812 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 NAP1L2Q9ULW6 460 aaPredicted RBP13.07□□□□□ -0.32
CPNE3-210ENST00000621245 NID2Q14112 1375 aa13.07□□□□□ -0.32
CPNE3-210ENST00000621245 IGLV3-22A0A075B6J6 115 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 EDIL3O43854 480 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 CSPG5O95196 566 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 CD52P31358 61 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 GATMP50440 423 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 MRPS6P82932 125 aaKnown RBP13.06□□□□□ -0.32
CPNE3-210ENST00000621245 PKN1Q16512 942 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 CEP55Q53EZ4 464 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 RTN4RL1Q86UN2 441 aaPredicted RBP13.06□□□□□ -0.32
CPNE3-210ENST00000621245 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 BRF1Q92994 677 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 PHKBQ93100 1093 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 SMARCAD1Q9H4L7 1026 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 UBE2ZQ9H832 354 aaPredicted RBP13.06□□□□□ -0.32
CPNE3-210ENST00000621245 COG5Q9UP83 839 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 NFASCO94856 1347 aa13.06□□□□□ -0.32
CPNE3-210ENST00000621245 ZBTB42B2RXF5 422 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 MEIS1O00470 390 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 ENPP3O14638 875 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 DHX15O43143 795 aaKnown RBP13.05□□□□□ -0.32
CPNE3-210ENST00000621245 ATP4AP20648 1035 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 METAP2P50579 478 aaKnown RBP eCLIP13.05□□□□□ -0.32
CPNE3-210ENST00000621245 PFKFB3Q16875 520 aaPredicted RBP13.05□□□□□ -0.32
CPNE3-210ENST00000621245 TAF2Q6P1X5 1199 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 CCDC60Q8IWA6 550 aaPredicted RBP13.05□□□□□ -0.32
CPNE3-210ENST00000621245 TMEM192Q8IY95 271 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 APBB2Q92870 758 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 LMCD1Q9NZU5 365 aa13.05□□□□□ -0.32
CPNE3-210ENST00000621245 IGKV6D-21A0A0A0MT36 114 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 ATG7O95352 703 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 SCG2P13521 617 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 COL9A1P20849 921 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 KCNA5P22460 613 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 HSPA4P34932 840 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 GPM6BQ13491 265 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 TMEM266Q2M3C6 531 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 TSHZ1Q6ZSZ6 1077 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-210ENST00000621245 MRPL38Q96DV4 380 aaKnown RBP13.04□□□□□ -0.32
CPNE3-210ENST00000621245 SDF4Q9BRK5 362 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 TMX1Q9H3N1 280 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
CPNE3-210ENST00000621245 ADGRA3Q8IWK6 1321 aa13.04□□□□□ -0.32
CPNE3-210ENST00000621245 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.03□□□□□ -0.32
CPNE3-210ENST00000621245 H3BNC9 293 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 GRM6O15303 877 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 GPR37O15354 613 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 MAFGO15525 162 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 MGEA5O60502 916 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 DTNBO60941 627 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 IL9P15248 144 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 RPS6KB1P23443 525 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 CTNNB1P35222 781 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 STAT5BP51692 787 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 AP3B2Q13367 1082 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 KRT32Q14532 448 aa13.03□□□□□ -0.32
CPNE3-210ENST00000621245 NTRK3Q16288 839 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms