RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 UBL4BQ8N7F7 174 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 KLHL23Q8NBE8 558 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 SNAP23O00161 211 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 MAPK13O15264 365 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 CPP00450 1065 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 GLI1P08151 1106 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 KCNJ2P63252 427 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 DR1Q01658 176 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 CABP7Q86V35 215 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 ZNF483Q8TF39 744 aaPredicted RBP13.5□□□□□ -0.25
SYNRG-229ENST00000621136 DDX50Q9BQ39 737 aaKnown RBP13.5□□□□□ -0.25
SYNRG-229ENST00000621136 PFDN4Q9NQP4 134 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 PANK4Q9NVE7 773 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 TTI1O43156 1089 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 CACNB1Q02641 598 aaPredicted RBP13.5□□□□□ -0.25
SYNRG-229ENST00000621136 MESDQ14696 234 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 DDX18Q9NVP1 670 aaKnown RBP13.5□□□□□ -0.25
SYNRG-229ENST00000621136 CAPN6Q9Y6Q1 641 aa13.5□□□□□ -0.25
SYNRG-229ENST00000621136 LTN1O94822 1766 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 TECP42680 631 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 CETN1Q12798 172 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SPATA21Q7Z572 469 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 TRIML2Q8N7C3 387 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 HSD17B3P37058 310 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 TMED10P49755 219 aaKnown RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 ALDH5A1P51649 535 aaPredicted RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 ARHGEF18Q6ZSZ5 1173 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 CROCCP2Q86T23 111 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 CRACR2BQ8N4Y2 399 aaPredicted RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 ZNF579Q8NAF0 562 aaKnown RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 BICD1Q96G01 975 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 CLMNQ96JQ2 1002 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 NUF2Q9BZD4 464 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 CARD9Q9H257 536 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 USP15Q9Y4E8 981 aaPredicted RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 PSMD14O00487 310 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SART1O43290 800 aaKnown RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 TBCAO75347 108 aaKnown RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 TPD52P55327 224 aaPredicted RBP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 PPP1R21Q6ZMI0 780 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SGMS1Q86VZ5 419 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 MAML1Q92585 1016 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
SYNRG-229ENST00000621136 SPATA17Q96L03 361 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 HAO1Q9UJM8 370 aa13.49□□□□□ -0.25
SYNRG-229ENST00000621136 PHKA1P46020 1223 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CPA2P48052 419 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CCDC87Q9NVE4 849 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 UBAP1Q9NZ09 502 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TRMT112Q9UI30 125 aaKnown RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 RWDD2AQ9UIY3 292 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 XDHP47989 1333 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 WDR19Q8NEZ3 1342 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 ABCD1P33897 745 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 PCYT1AP49585 367 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 MRPS9P82933 396 aaKnown RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 PLCB4Q15147 1175 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CHRNA2Q15822 529 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 NME8Q8N427 588 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TEKT1Q969V4 418 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 MRPL46Q9H2W6 279 aaKnown RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 ZFP69BQ9UJL9 534 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TTC36A6NLP5 189 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 SH3BGRP55822 239 aaPredicted RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CUL1Q13616 776 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 RGS9BPQ6ZS82 235 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 ELOA2Q8IYF1 753 aaPredicted RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 IFNL3Q8IZI9 196 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 FAM81AQ8TBF8 368 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 P3H4Q92791 437 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CYP27B1O15528 508 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 TOM1O60784 492 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 LONRF1Q17RB8 773 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 ITIH6Q6UXX5 1313 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 NANOGNBQ7Z5D8 188 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 ZNF654Q8IZM8 581 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 OPTNQ96CV9 577 aa13.48□□□□□ -0.25
SYNRG-229ENST00000621136 EPB41L4AQ9HCS5 686 aaPredicted RBP13.48□□□□□ -0.25
SYNRG-229ENST00000621136 CIAO1O76071 339 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 PMS2P54278 862 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
SYNRG-229ENST00000621136 C1orf146Q5VVC0 180 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 CASKIN2Q8WXE0 1202 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 ADCY3O60266 1144 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 DMPKQ09013 629 aa13.47□□□□□ -0.25
SYNRG-229ENST00000621136 ZBTB17Q13105 803 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms