RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LARP1BQ659C4 914 aaKnown RBP18.26■□□□□ 0.51
CD40-207ENST00000620709 ZNF713Q8N859 430 aaPredicted RBP18.26■□□□□ 0.51
CD40-207ENST00000620709 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
CD40-207ENST00000620709 IFIH1Q9BYX4 1025 aaKnown RBP18.26■□□□□ 0.51
CD40-207ENST00000620709 FAM49AQ9H0Q0 323 aaPredicted RBP18.26■□□□□ 0.51
CD40-207ENST00000620709 TNFRSF10AO00220 468 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 ACTR2P61160 394 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 ERVK-21P61565 698 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
CD40-207ENST00000620709 PFKFB3Q16875 520 aaPredicted RBP18.25■□□□□ 0.51
CD40-207ENST00000620709 CEP55Q53EZ4 464 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 TAF2Q6P1X5 1199 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 CLEC17AQ6ZS10 378 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 C17orf80Q9BSJ5 609 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 GLT8D2Q9H1C3 349 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
CD40-207ENST00000620709 AGO4Q9HCK5 861 aaKnown RBP18.25■□□□□ 0.51
CD40-207ENST00000620709 TCF20Q9UGU0 1960 aaKnown RBP18.24■□□□□ 0.51
CD40-207ENST00000620709 LPXNO60711 386 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 DTNBO60941 627 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 SCG2P13521 617 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 INSRRP14616 1297 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 AP3B2Q13367 1082 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 FBXO22Q8NEZ5 403 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 APBB2Q92870 758 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 UHRF1Q96T88 793 aaPredicted RBP18.24■□□□□ 0.51
CD40-207ENST00000620709 PCYT2Q99447 389 aa18.24■□□□□ 0.51
CD40-207ENST00000620709 ZSCAN22P10073 491 aaPredicted RBP18.23■□□□□ 0.51
CD40-207ENST00000620709 SREBF1P36956 1147 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 STAT5BP51692 787 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 KCNQ1P51787 676 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 TMEM62Q0P6H9 643 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
CD40-207ENST00000620709 AAK1Q2M2I8 961 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 MARCH8Q5T0T0 291 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 PLA2G4DQ86XP0 818 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 TRAPPC12Q8WVT3 735 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 PHKBQ93100 1093 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 C6orf50Q9HD87 102 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 MTMR6Q9Y217 621 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 CDY2AQ9Y6F7 541 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 NFASCO94856 1347 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.23■□□□□ 0.51
CD40-207ENST00000620709 VPS37CA5D8V6 355 aaPredicted RBP18.23■□□□□ 0.51
CD40-207ENST00000620709 RRN3P2A6NIE6 340 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 BACH1O14867 736 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 PLCB4Q15147 1175 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
CD40-207ENST00000620709 TOP1MTQ969P6 601 aa18.23■□□□□ 0.51
CD40-207ENST00000620709 SIP14410 1827 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 MEIS1O00470 390 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 CLK2P49760 499 aaKnown RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 MRPS6P82932 125 aaKnown RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 HTRA4P83105 476 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 MGAT3Q09327 533 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 MKRN4PQ13434 485 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 NBR1Q14596 966 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 LPIN1Q14693 890 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 FOXD4L5Q5VV16 416 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 FOXD4L4Q8WXT5 416 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 HLA-CQ95604 372 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 NECAB3Q96P71 396 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
CD40-207ENST00000620709 ORC3Q9UBD5 711 aaPredicted RBP18.22■□□□□ 0.51
CD40-207ENST00000620709 M0QZ92 97 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 ADAMTS3O15072 1205 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 BAG4O95429 457 aaKnown RBP18.21■□□□□ 0.51
CD40-207ENST00000620709 F13A1P00488 732 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 MCM4P33991 863 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 TEX2Q8IWB9 1127 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 REXO1Q8N1G1 1221 aaKnown RBP18.21■□□□□ 0.51
CD40-207ENST00000620709 LMCD1Q9NZU5 365 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 COG5Q9UP83 839 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 STK36Q9NRP7 1315 aa18.21■□□□□ 0.51
CD40-207ENST00000620709 POTEB3A0JP26 581 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 MBLAC1A4D2B0 266 aaPredicted RBP18.2■□□□□ 0.5
CD40-207ENST00000620709 DDX11L8A8MPP1 907 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 FAM86B1E9PN63 330 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 H3BQV1 296 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 PRPF3O43395 683 aaKnown RBP18.2■□□□□ 0.5
CD40-207ENST00000620709 FAM86B2P0C5J1 330 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 FDPSP14324 419 aaKnown RBP18.2■□□□□ 0.5
CD40-207ENST00000620709 IFNAR1P17181 557 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 IBSPP21815 317 aaPredicted RBP18.2■□□□□ 0.5
CD40-207ENST00000620709 NTRK3Q16288 839 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 FBXO47Q5MNV8 452 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 IER5Q5VY09 327 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 FAM160B1Q5W0V3 765 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 POTEBQ6S5H4 581 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 PLPPR4Q7Z2D5 763 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 TRMT1LQ7Z2T5 733 aaKnown RBP18.2■□□□□ 0.5
CD40-207ENST00000620709 RPAINQ86UA6 219 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 RASGRP4Q8TDF6 673 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 ZNF577Q9BSK1 485 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 TCEAL9Q9UHQ7 104 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 ATP6V1DQ9Y5K8 247 aa18.2■□□□□ 0.5
CD40-207ENST00000620709 GOLGA6L22H0YM25 854 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 CCNE2O96020 404 aa18.19■□□□□ 0.5
CD40-207ENST00000620709 CD52P31358 61 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms