RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 FLOT2Q14254 428 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NCOA7Q8NI08 942 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ATAD3AQ9NVI7 634 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 MSH6P52701 1360 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ATICP31939 592 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KCNJ1P48048 391 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 BZW1Q7L1Q6 419 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 PHACTR1Q9C0D0 580 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 MTFR1LQ9H019 292 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 BRD8Q9H0E9 1235 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 DPH5Q9H2P9 285 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SLC52A2Q9HAB3 445 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ZNF711Q9Y462 761 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ROBO2Q9HCK4 1378 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ERICH3Q5RHP9 1530 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 IL10P22301 178 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 IL15P40933 162 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 CORO7P57737 925 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 AMFRQ9UKV5 643 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SRPRBQ9Y5M8 271 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 PNPLA6Q8IY17 1366 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 S100A9P06702 114 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 DOK7Q18PE1 504 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 GSDMAQ96QA5 445 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CCT8L2Q96SF2 557 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 FGFBP2Q9BYJ0 223 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 YTHDF3Q7Z739 585 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 CLEC10AQ8IUN9 316 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 USP40Q9NVE5 1235 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 NOVA2Q9UNW9 492 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 TOP2AP11388 1531 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 MAP3K12Q12852 859 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 KLC3Q6P597 504 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ZNF713Q8N859 430 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 DDHD1Q8NEL9 900 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ADCY9O60503 1353 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SYCE1LA8MT33 242 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 IKBKBO14920 756 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 POSTNQ15063 836 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 ERFEQ4G0M1 354 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CCDC105Q8IYK2 499 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 CACTIN-AS1Q8N1I8 211 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 SH3RF3Q8TEJ3 882 aaPredicted RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 DCLRE1BQ9H816 532 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 MTO1Q9Y2Z2 717 aaKnown RBP3.32□□□□□ -1.88
NEB-220ENST00000618972 TBX22Q9Y458 520 aa3.32□□□□□ -1.88
NEB-220ENST00000618972 RPS6KA5O75582 802 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PAX7P23759 505 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ZNF280DQ6N043 979 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ERMNQ8TAM6 284 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 KRT14P02533 472 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ESRRAP11474 423 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 CNGA3Q16281 694 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 HPS1Q92902 700 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 FGD4Q96M96 766 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MAST3O60307 1309 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 FRMPD2Q68DX3 1309 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 CLASP2O75122 1294 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 LETM2Q2VYF4 491 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 LRRN4Q8WUT4 740 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 SDCCAG3Q96C92 435 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ALDH8A1Q9H2A2 487 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 ARHGAP26Q9UNA1 814 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PALM3A6NDB9 673 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 MAP2K7O14733 419 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 C21orf2O43822 256 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 BAG2O95816 211 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PHKG2P15735 406 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 LAMC2Q13753 1193 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MIGA2Q7L4E1 593 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 LUZP2Q86TE4 346 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TEX12Q9BXU0 123 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 COPG1Q9Y678 874 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 PTPRTO14522 1441 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ARHGAP42A6NI28 874 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8TH3BQL2 631 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PFDN6O15212 129 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 GYG2O15488 501 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 IDO1P14902 403 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 DAB2IPQ5VWQ8 1189 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 TTC5Q8N0Z6 440 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CREB1P16220 341 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ADSLP30566 484 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 INTS8Q75QN2 995 aaKnown RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 HS2ST1Q7LGA3 356 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 MCM9Q9NXL9 1143 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 EDIL3O43854 480 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PDE1BQ01064 536 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 CYTH2Q99418 400 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 NAPBQ9H115 298 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ISLR2Q6UXK2 745 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 LRP10Q7Z4F1 713 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 THEMISQ8N1K5 641 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 ICA1LQ8NDH6 482 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ZMYND8Q9ULU4 1186 aaPredicted RBP3.31□□□□□ -1.88
NEB-220ENST00000618972 RWDD3Q9Y3V2 267 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PALLDQ8WX93 1383 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 FAM204AQ9H8W3 233 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 PCDHAC2Q9Y5I4 1007 aa3.31□□□□□ -1.88
NEB-220ENST00000618972 ZNF18P17022 549 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms