RNA–Protein interactions for RNA: ENST00000618834.1

PCDHA4-204, Transcript of protocadherin alpha 4, humanhuman

BASIC

Gene PCDHA4, Length 10,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-204ENST00000618834 RASSF3Q86WH2 238 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 CALR3Q96L12 384 aaKnown RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 CPSF3Q9UKF6 684 aaKnown RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 WDR64B1ANS9 1081 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 SNX2O60749 519 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 BLVRAP53004 296 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 ATG3Q9NT62 314 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 IL10P22301 178 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 LARP4BQ92615 738 aaKnown RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 TEKT3Q9BXF9 490 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 PODXLO00592 558 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 HAUS5O94927 633 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 FBXO2Q9UK22 296 aaPredicted RBP12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 GOLGA8SH3BPF8 625 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 SORBS3O60504 671 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 MECOMQ03112 1051 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 UBE3AQ05086 875 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 RINLQ6ZS11 566 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 MAPKAPK5Q8IW41 473 aa12.32□□□□□ -0.44
PCDHA4-204ENST00000618834 KRT38O76015 456 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 COPS2P61201 443 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TFAP4Q01664 338 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 KCNA1Q09470 495 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM47AQ5JRC9 791 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SMYD4Q8IYR2 804 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 RUBCNQ92622 972 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 VPS39Q96JC1 886 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 GINM1Q9NU53 330 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SERPINB1P30740 379 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 GYS2P54840 703 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TJAP1Q5JTD0 557 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 AK8Q96MA6 479 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TRIM45Q9H8W5 580 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 UBE2TQ9NPD8 197 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ITM2BQ9Y287 266 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 NDUFB9Q9Y6M9 179 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 KIF20BQ96Q89 1820 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TFDP1Q14186 410 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 DMC1Q14565 340 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ACBD5Q5T8D3 534 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 MAN1B1Q9UKM7 699 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 MYH3P11055 1940 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 KPNA7A9QM74 516 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ZNF263O14978 683 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 B4GALNT2Q8NHY0 566 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM193BQ96PV7 902 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ZSWIM6Q9HCJ5 1215 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SLC5A4Q9NY91 659 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 CCDC78A2IDD5 438 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ZSCAN9O15535 394 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 PPP6R2O75170 966 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 DEFA1P59665 94 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 DEFA3P59666 94 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 NSUN2Q08J23 767 aaKnown RBP eCLIP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 FAF2Q96CS3 445 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 OTUB1Q96FW1 271 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 MRPL11Q9Y3B7 192 aaKnown RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 RNMTO43148 476 aaKnown RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TBC1D4O60343 1298 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 HOXA7P31268 230 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 FBXW4P57775 412 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 PKP1Q13835 747 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SYNMO15061 1565 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 RBBP7Q16576 425 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TOGARAM2Q6ZUX3 1019 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 CYGBQ8WWM9 190 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 STMN3Q9NZ72 180 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SUGT1Q9Y2Z0 365 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 KIAA0586Q9BVV6 1533 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 PIK3R2O00459 728 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SPTLC3Q9NUV7 552 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ZSCAN32Q9NX65 697 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 LCMT1Q9UIC8 334 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 DCTN4Q9UJW0 460 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SH3TC1Q8TE82 1336 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 EIF4E1BA6NMX2 242 aaKnown RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ORC4O43929 436 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 LZTS3O60299 673 aaPredicted RBP12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ATP5JP18859 108 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 TCP10Q12799 353 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 ARL13BQ3SXY8 428 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 BTNL9Q6UXG8 535 aa12.31□□□□□ -0.44
PCDHA4-204ENST00000618834 SCRN1Q12765 414 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 THAP11Q96EK4 314 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 FAM89AQ96GI7 184 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 HSPA1AP0DMV8 641 aaKnown RBP12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 HSPA1BP0DMV9 641 aaKnown RBP12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 GUCY1A3Q02108 690 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 IMPG1Q17R60 797 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 KLHL38Q2WGJ6 581 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 ACCSQ96QU6 501 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 HMGXB3Q12766 1538 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 PSMA2P25787 234 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 IGBP1P78318 339 aa12.3□□□□□ -0.44
PCDHA4-204ENST00000618834 LRRC8EQ6NSJ5 796 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms