RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 GTPBP6O43824 516 aaPredicted RBP18.1■□□□□ 0.49
BRCA1-228ENST00000618469 CTSHP09668 335 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 KRT2P35908 639 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 KRT76Q01546 638 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 ZNF618Q5T7W0 954 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 PIK3AP1Q6ZUJ8 805 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
BRCA1-228ENST00000618469 BRMS1Q9HCU9 246 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 TUBE1Q9UJT0 475 aa18.1■□□□□ 0.49
BRCA1-228ENST00000618469 SIP14410 1827 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TLL1O43897 1013 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 ACTN1P12814 892 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 STAT5BP51692 787 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 IGBP1P78318 339 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TRIM29Q14134 588 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 LETM2Q2VYF4 491 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TMEM31Q5JXX7 168 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 FAM160B1Q5W0V3 765 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 ZNF746Q6NUN9 644 aaPredicted RBP18.09■□□□□ 0.49
BRCA1-228ENST00000618469 MIS18BP1Q6P0N0 1132 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TRAF7Q6Q0C0 670 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 ABHD15Q6UXT9 468 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TET1Q8NFU7 2136 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 ZSCAN31Q96LW9 406 aaPredicted RBP18.09■□□□□ 0.49
BRCA1-228ENST00000618469 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
BRCA1-228ENST00000618469 TRANK1O15050 2925 aa18.09■□□□□ 0.49
BRCA1-228ENST00000618469 IGKV6D-21A0A0A0MT36 114 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 CHMP2AO43633 222 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 ST18O60284 1047 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 GAS7O60861 476 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 NBNO60934 754 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 ATG7O95352 703 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 ADAM17P78536 824 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 NR5A1Q13285 461 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 PLCB4Q15147 1175 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 Q4G0T1 1027 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 LRCH2Q5VUJ6 765 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 MOXD1Q6UVY6 613 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 PLPPR4Q7Z2D5 763 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 TMCO2Q7Z6W1 182 aaPredicted RBP18.08■□□□□ 0.48
BRCA1-228ENST00000618469 NEK8Q86SG6 692 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 SMAP1Q8IYB5 467 aaPredicted RBP18.08■□□□□ 0.48
BRCA1-228ENST00000618469 GJA10Q969M2 543 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 CD320Q9NPF0 282 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 C11orf16Q9NQ32 467 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 ZNF302Q9NR11 478 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 DDX25Q9UHL0 483 aaKnown RBP18.08■□□□□ 0.48
BRCA1-228ENST00000618469 SAMM50Q9Y512 469 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 PTPRSQ13332 1948 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 WDR81Q562E7 1941 aa18.08■□□□□ 0.48
BRCA1-228ENST00000618469 FAM205CA6NFA0 338 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 SLC37A4O43826 429 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 CAND2O75155 1236 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 PARNO95453 639 aaKnown RBP18.07■□□□□ 0.48
BRCA1-228ENST00000618469 MMP1P03956 469 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 INSRRP14616 1297 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 SLC26A2P50443 739 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 TAP1Q03518 808 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 MBTPS1Q14703 1052 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 EARS2Q5JPH6 523 aaKnown RBP18.07■□□□□ 0.48
BRCA1-228ENST00000618469 PDXDC2PQ6P474 469 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 RUFY4Q6ZNE9 571 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 SLC5A5Q92911 643 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 TBC1D32Q96NH3 1257 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 RIT2Q99578 217 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 LLPHQ9BRT6 129 aaKnown RBP18.07■□□□□ 0.48
BRCA1-228ENST00000618469 TEKT3Q9BXF9 490 aa18.07■□□□□ 0.48
BRCA1-228ENST00000618469 MYH9P35579 1960 aaKnown RBP18.07■□□□□ 0.48
BRCA1-228ENST00000618469 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
BRCA1-228ENST00000618469 IGSF9BQ9UPX0 1349 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 CYP3A7-CYP3A51PA0A087WV96 503 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 POTEB3A0JP26 581 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 MBLAC1A4D2B0 266 aaPredicted RBP18.06■□□□□ 0.48
BRCA1-228ENST00000618469 WDR64B1ANS9 1081 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 RSPH10B2B2RC85 870 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 CXCL10P02778 98 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 PSAPP07602 524 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 RSPH10BP0C881 870 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 CYP3A7P24462 503 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 GRB10Q13322 594 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 GPNMBQ14956 572 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 SWSAP1Q6NVH7 229 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 TAF2Q6P1X5 1199 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 POTEBQ6S5H4 581 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 DIS3L2Q8IYB7 885 aaKnown RBP18.06■□□□□ 0.48
BRCA1-228ENST00000618469 TRAPPC12Q8WVT3 735 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 TNPO1Q92973 898 aaKnown RBP18.06■□□□□ 0.48
BRCA1-228ENST00000618469 TNFRSF25Q93038 417 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 HLA-CQ95604 372 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 MBOAT7Q96N66 472 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 PCDHA10Q9Y5I2 948 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
BRCA1-228ENST00000618469 RRN3P2A6NIE6 340 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 CCNT1O60563 726 aaKnown RBP18.05■□□□□ 0.48
BRCA1-228ENST00000618469 GCFC2P16383 781 aaKnown RBP18.05■□□□□ 0.48
BRCA1-228ENST00000618469 HMGN5P82970 282 aaKnown RBP18.05■□□□□ 0.48
BRCA1-228ENST00000618469 GUCY1B3Q02153 619 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 MARCH8Q5T0T0 291 aa18.05■□□□□ 0.48
BRCA1-228ENST00000618469 CNKSR3Q6P9H4 555 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms