RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 SLC35C1Q96A29 364 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 BPTFQ12830 3046 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 COL11A2P13942 1736 aaPredicted RBP8.69□□□□□ -1.02
CHD7-212ENST00000618450 RPTORQ8N122 1335 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 AKAP3O75969 853 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 PTGIRP43119 386 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 KCNH2Q12809 1159 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 FRMD5Q7Z6J6 570 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 SIAH1Q8IUQ4 282 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 FUKQ8N0W3 1084 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 FAM133AQ8N9E0 248 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 COA7Q96BR5 231 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 PBKQ96KB5 322 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 EYA3Q99504 573 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 NLRC4Q9NPP4 1024 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 GRHL1Q9NZI5 618 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 MYH11P35749 1972 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 NDUFAB1O14561 156 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 MEIS2O14770 477 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 TGFB1I1O43294 461 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 RFC4P35249 363 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 MMP13P45452 471 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 KIAA0753Q2KHM9 967 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 CERKQ8TCT0 537 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 RAPGEF5Q92565 580 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.69□□□□□ -1.029e-6■□□□□ 9.3
CHD7-212ENST00000618450 ERVK-5Q9HDB9 667 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 JAG2Q9Y219 1238 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 GTPBP10A4D1E9 387 aaKnown RBP8.69□□□□□ -1.02
CHD7-212ENST00000618450 ALADP13716 330 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 ERCC3P19447 782 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 GUCY2FP51841 1108 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 PSMC6P62333 389 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 BIRC3Q13489 604 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 SIX1Q15475 284 aaPredicted RBP8.69□□□□□ -1.02
CHD7-212ENST00000618450 LSM14BQ9BX40 385 aaKnown RBP8.69□□□□□ -1.02
CHD7-212ENST00000618450 UBA5Q9GZZ9 404 aa8.69□□□□□ -1.02
CHD7-212ENST00000618450 E9PMD0 336 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 GNA14O95837 355 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 DRG2P55039 364 aaKnown RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 ZNF543Q08ER8 600 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 ADGRF4Q8IZF3 695 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 WDR66Q8TBY9 1149 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 RNF25Q96BH1 459 aaPredicted RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 CALML4Q96GE6 196 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 CABS1Q96KC9 395 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 CRAMP1Q96RY5 1269 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 SLC40A1Q9NP59 571 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PANK4Q9NVE7 773 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 COG5Q9UP83 839 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 ZNF652Q9Y2D9 606 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 NOC2LQ9Y3T9 749 aaKnown RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 SCN9AQ15858 1988 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 GMNCA6NCL1 334 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 TMOD1P28289 359 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 SLC15A2Q16348 729 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 CFAP58Q5T655 872 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PPP4R3CPQ6ZMV5 832 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PROCA1Q8NCQ7 364 aaPredicted RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 CD101Q93033 1021 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 ACSBG1Q96GR2 724 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 TMEM109Q9BVC6 243 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 CD248Q9HCU0 757 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.68□□□□□ -1.02
CHD7-212ENST00000618450 VAV3Q9UKW4 847 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 LOC102724159A0A0B4J2E5 919 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 VCAM1P19320 739 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PAFAH1B1P43034 410 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PTENP60484 403 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PDE4CQ08493 712 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PLS1Q14651 629 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 PWP2Q15269 919 aaKnown RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 GALNTL6Q49A17 601 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 FAM26FQ5R3K3 315 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 SPTY2D1Q68D10 685 aaPredicted RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 ANKLE1Q8NAG6 615 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 DNAJC18Q9H819 358 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 DDX4Q9NQI0 724 aaKnown RBP8.68□□□□□ -1.02
CHD7-212ENST00000618450 KLC4Q9NSK0 619 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 DMAC2Q9NW81 257 aa8.68□□□□□ -1.02
CHD7-212ENST00000618450 RTN2O75298 545 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 DNAJC8O75937 253 aaPredicted RBP8.67□□□□□ -1.02
CHD7-212ENST00000618450 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
CHD7-212ENST00000618450 SHBGP04278 402 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 MRPL12P52815 198 aaKnown RBP8.67□□□□□ -1.02
CHD7-212ENST00000618450 MOXD1Q6UVY6 613 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 MAPKAPK5Q8IW41 473 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SEC16BQ96JE7 1060 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SLITRK6Q9H5Y7 841 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SRP68Q9UHB9 627 aaKnown RBP8.67□□□□□ -1.02
CHD7-212ENST00000618450 USP20Q9Y2K6 914 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 CAPN7Q9Y6W3 813 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 LTBP4Q8N2S1 1624 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 PNMA6FA0A0J9YX94 578 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SHTN1A0MZ66 631 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 LDHBP07195 334 aaKnown RBP8.67□□□□□ -1.02
CHD7-212ENST00000618450 GHRP10912 638 aa8.67□□□□□ -1.02
CHD7-212ENST00000618450 SHMT1P34896 483 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms