RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 HSPA9P38646 679 aaKnown RBP7.97□□□□□ -1.13
PDE6A-205ENST00000617647 CETN2P41208 172 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ZFYVE27Q5T4F4 411 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ERMARDQ5T6L9 678 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 IZUMO2Q6UXV1 221 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ARHGEF18Q6ZSZ5 1173 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 MIGA2Q7L4E1 593 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 Q9H521 79 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 PARVBQ9HBI1 364 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 TBC1D7Q9P0N9 293 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 TUBGCP4Q9UGJ1 667 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ZMYND8Q9ULU4 1186 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-205ENST00000617647 SLC12A4Q9UP95 1085 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 NPHP3-ACAD11A0A0J9YXS1 232 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 BTBD18B2RXH4 712 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 SART1O43290 800 aaKnown RBP7.97□□□□□ -1.13
PDE6A-205ENST00000617647 SPAG7O75391 227 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ADAMTS2O95450 1211 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 PENKP01210 267 aaPredicted RBP7.97□□□□□ -1.13
PDE6A-205ENST00000617647 FAM163BP0C2L3 166 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 RARAP10276 462 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 MYBPC2Q14324 1141 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 ZNF174Q15697 407 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 LIN52Q52LA3 116 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 LRRC74BQ6ZQY2 392 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 PTPRN2Q92932 1015 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 CCT7Q99832 543 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 LRRC27Q9C0I9 530 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 HSD3B7Q9H2F3 369 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 TBC1D23Q9NUY8 699 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 IL1RAPL1Q9NZN1 696 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 SUN2Q9UH99 717 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 DOLKQ9UPQ8 538 aa7.97□□□□□ -1.13
PDE6A-205ENST00000617647 AFF2P51816 1311 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 TMEM247A6NEH6 219 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 ABCB7O75027 752 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 CTDNEP1O95476 244 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 ESRRAP11474 423 aaPredicted RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 PMS2P54278 862 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 PHEXP78562 749 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 PPIDQ08752 370 aaKnown RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 C16orf72Q14CZ0 275 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 MARK2Q7KZI7 788 aaKnown RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 KRT27Q7Z3Y8 459 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 ALDH8A1Q9H2A2 487 aaPredicted RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 THAP9Q9H5L6 903 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 XAB2Q9HCS7 855 aaKnown RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 NKX1-2Q9UD57 310 aaPredicted RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 AMACRQ9UHK6 382 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 DBR1Q9UK59 544 aaKnown RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 RBMX2Q9Y388 322 aaKnown RBP7.96□□□□□ -1.13
PDE6A-205ENST00000617647 TMED5Q9Y3A6 229 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 GLI2P10070 1586 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 SALL3Q9BXA9 1300 aa7.96□□□□□ -1.13
PDE6A-205ENST00000617647 CAMSAP1Q5T5Y3 1602 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 BICDL2A1A5D9 508 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 BOLA2-SMG1P6H3BVE0 249 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 CYP27B1O15528 508 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 HOXD12P35452 270 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 STRN3Q13033 797 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 DAB2IPQ5VWQ8 1189 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 NME9Q86XW9 330 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 FOXP4Q8IVH2 680 aaPredicted RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 NOSTRINQ8IVI9 506 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 IQCF2Q8IXL9 164 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 OSCARQ8IYS5 282 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 EAF2Q96CJ1 260 aaPredicted RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 CDK19Q9BWU1 502 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 SPATA16Q9BXB7 569 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 ISCUQ9H1K1 167 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 AGPAT5Q9NUQ2 364 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 TLR7Q9NYK1 1049 aaKnown RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 KIAA0232Q92628 1395 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 MLH3Q9UHC1 1453 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 ZC3H4Q9UPT8 1303 aaKnown RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 ABCC3O15438 1527 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 ANKRD26Q9UPS8 1709 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 S100A1P23297 94 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 UBA7P41226 1012 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 DSG1Q02413 1049 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 COL9A3Q14050 684 aaPredicted RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 MMEL1Q495T6 779 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 TMC4Q7Z404 712 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 KIAA2013Q8IYS2 634 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 TRIML2Q8N7C3 387 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 U2AF1L4Q8WU68 220 aaKnown RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 PYM1Q9BRP8 204 aaKnown RBP7.96□□□□□ -1.14
PDE6A-205ENST00000617647 MYL10Q9BUA6 226 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 SH2D4AQ9H788 454 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 SIGLEC1Q9BZZ2 1709 aa7.96□□□□□ -1.14
PDE6A-205ENST00000617647 A0A1W2PP64 1363 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 CFAP69A5D8W1 941 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 TRIM64CA6NLI5 447 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 SNX3O60493 162 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 APOEP02649 317 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 IFIT1P09914 478 aaKnown RBP7.95□□□□□ -1.14
PDE6A-205ENST00000617647 KRT15P19012 456 aa7.95□□□□□ -1.14
PDE6A-205ENST00000617647 MRPS9P82933 396 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms