RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 LRRC63Q05C16 580 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FAM133AQ8N9E0 248 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 TUBGCP2Q9BSJ2 902 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 KCND1Q9NSA2 647 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 KRT76Q01546 638 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 NCBP1Q09161 790 aaKnown RBP22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MIIPQ5JXC2 388 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 TMEM139Q8IV31 216 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FGD4Q96M96 766 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 IWS1Q96ST2 819 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 TMX1Q9H3N1 280 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 NMRK2Q9NPI5 230 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PRDM4Q9UKN5 801 aa22.82■■□□□ 1.24
CNTNAP3B-212ENST00000617422 LRRC37A2A6NM11 1700 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 LGALS16A8MUM7 142 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MAFGO15525 162 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PGK2P07205 417 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 KCNA1Q09470 495 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 DAW1Q8N136 415 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ANKRD20A12PQ8NF67 263 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FIZ1Q96SL8 496 aa22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 GBA2Q9HCG7 927 aaPredicted RBP22.81■■□□□ 1.24
CNTNAP3B-212ENST00000617422 USP27XA6NNY8 438 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 WDR64B1ANS9 1081 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 B4DLN1 442 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 RNF225M0QZC1 329 aaPredicted RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 TBCAO75347 108 aaKnown RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 LYPLA2O95372 231 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 OSBPP22059 807 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 RBL2Q08999 1139 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MAPK7Q13164 816 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 TRMT1LQ7Z2T5 733 aaKnown RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MAGEC2Q9UBF1 373 aaPredicted RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MYH11P35749 1972 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 POTEB2H3BUK9 544 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PRPF6O94906 941 aaKnown RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 EDNRBP24530 442 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 RARRES1P49788 294 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 JAK3P52333 1124 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 UBXN1Q04323 297 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 STXBP2Q15833 593 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZNF746Q6NUN9 644 aaPredicted RBP22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PADI6Q6TGC4 694 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SENP7Q9BQF6 1050 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 IKZF4Q9H2S9 585 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 COL4A3BPQ9Y5P4 624 aa22.8■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ARHGEF35A5YM69 484 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 EIF3JO75822 258 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 STAM2O75886 525 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 CELF2O95319 508 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 GYPCP04921 128 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZNF131P52739 623 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 DMTNQ08495 405 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FOXR2Q6PJQ5 311 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MRPL44Q9H9J2 332 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 CGNQ9P2M7 1197 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 KIF2AO00139 706 aaPredicted RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 NMT1P30419 496 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 YWHABP31946 246 aaKnown RBP22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SFNP31947 248 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 CBX1P83916 185 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SP4Q02446 784 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PTPN14Q15678 1187 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 NYAP1Q6ZVC0 841 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 CPLX3Q8WVH0 158 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 BRI3BPQ8WY22 251 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PORCNQ9H237 461 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 OLFML3Q9NRN5 406 aa22.79■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZNFX1Q9P2E3 1918 aaKnown RBP22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ITIH6Q6UXX5 1313 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 UNCXA6NJT0 531 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 BTBD19C9JJ37 291 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZNF862O60290 1169 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FAM13AO94988 1023 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 GUCY2CP25092 1073 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FXR1P51114 621 aaKnown RBP eCLIP22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PLA2G4FQ68DD2 849 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SEPT14Q6ZU15 432 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 C4orf19Q8IY42 314 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MYCT1Q8N699 235 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZNF526Q8TF50 670 aaPredicted RBP22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 JPH1Q9HDC5 661 aaPredicted RBP22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 DBR1Q9UK59 544 aaKnown RBP22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PCDHA10Q9Y5I2 948 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 NFASCO94856 1347 aa22.78■■□□□ 1.24
CNTNAP3B-212ENST00000617422 HIP1RO75146 1068 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SLC25A27O95847 323 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZSCAN20P17040 1043 aaPredicted RBP22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MTIF2P46199 727 aaKnown RBP22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PSMC5P62195 406 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ERVK-9P63128 1117 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ERVK-24P63145 666 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 GNPTABQ3T906 1256 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 ZC2HC1CQ53FD0 456 aaPredicted RBP22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 CST9Q5W186 159 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 MAEAQ7L5Y9 396 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 FAM114A1Q8IWE2 563 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 PARVGQ9HBI0 331 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 SOCS7O14512 581 aa22.77■■□□□ 1.24
CNTNAP3B-212ENST00000617422 BACH1O14867 736 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms