RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 EEF1GP26641 437 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 CXCR5P32302 372 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 GUCY2FP51841 1108 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 OR6B2Q6IFH4 312 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PNMA8AQ86V59 439 aaPredicted RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 CDR2LQ86X02 465 aaPredicted RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PASD1Q8IV76 773 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 HEXIM2Q96MH2 286 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 JMJD4Q9H9V9 463 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 NPHP3-ACAD11A0A0J9YXS1 232 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PGK2P07205 417 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 RPS12P25398 132 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 HOXD10P28358 340 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 CDO1Q16878 200 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 POTEAQ6S8J7 498 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 SND1Q7KZF4 910 aaKnown RBP eCLIP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 GPR161Q8N6U8 529 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 OR6J1Q8NGC5 347 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 KIF2CQ99661 725 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PYCARDQ9ULZ3 195 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 KRIT1O00522 736 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 VEGFAP15692 232 aaPredicted RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 NMT1P30419 496 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 COPB2P35606 906 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PRCPP42785 496 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 PLA2G4FQ68DD2 849 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 SLC30A10Q6XR72 485 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 SYCE1Q8N0S2 351 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 CACTINQ8WUQ7 758 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 MRFAP1L1Q96HT8 127 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 POLR3FQ9H1D9 316 aaPredicted RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 DDX41Q9UJV9 622 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF148Q9UQR1 794 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 ZDHHC9Q9Y397 364 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 UPP2O95045 317 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 ARID5BQ14865 1188 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 KRT31Q15323 416 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 HADHQ16836 314 aaKnown RBP11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 RESP18Q5W5W9 173 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 SHC4Q6S5L8 630 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 UNC13DQ70J99 1090 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 METTL23Q86XA0 190 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 RSAD2Q8WXG1 361 aa11.01□□□□□ -0.65
SMARCA1-205ENST00000617310 C19orf81C9J6K1 198 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 ELF1P32519 619 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 NPEPPSP55786 919 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 TGFB2P61812 414 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 PSMC5P62195 406 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 COASYQ13057 564 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 GNASQ5JWF2 1037 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 LRRC8AQ8IWT6 810 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 ENOX1Q8TC92 643 aaKnown RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 FBXO41Q8TF61 875 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 CALN1Q9BXU9 219 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 RRAGCQ9HB90 399 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 NGRNQ9NPE2 291 aaKnown RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 TUBB4AP04350 444 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 MYBP10242 640 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 RARBP10826 455 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 MYO1EQ12965 1108 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 KRT222Q8N1A0 295 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 XXYLT1Q8NBI6 393 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 FAM167AQ96KS9 214 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 MTA3Q9BTC8 594 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 VPS37BQ9H9H4 285 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 SMIM22K7EJ46 135 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 OPA1O60313 960 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 TBC1D8O95759 1140 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 FTCDO95954 541 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 NR3C1P04150 777 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 SSTR3P32745 418 aaPredicted RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 EIF4A3P38919 411 aaKnown RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 CAP2P40123 477 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 PHKA2P46019 1235 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF667Q5HYK9 610 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 SREK1Q8WXA9 508 aaKnown RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 CCDC51Q96ER9 411 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF512BQ96KM6 892 aaPredicted RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
SMARCA1-205ENST00000617310 MTRQ99707 1265 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 RFX7Q2KHR2 1363 aa11□□□□□ -0.65
SMARCA1-205ENST00000617310 H7C0C1 242 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 WNT10BO00744 389 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 RGL2O15211 777 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 CTNND1O60716 968 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 OATP04181 439 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ZNF18P17022 549 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 SAT1P21673 171 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 FGFR2P21802 821 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 ATP5OP48047 213 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TROAPQ12815 778 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 LRRC71Q8N4P6 559 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 CCNYQ8ND76 341 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 TRIM58Q8NG06 486 aa10.99□□□□□ -0.65
SMARCA1-205ENST00000617310 RAD54LQ92698 747 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms