RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 DCP1AQ9NPI6 582 aaPredicted RBP12.28□□□□□ -0.44
RABGAP1-213ENST00000616002 PUF60Q9UHX1 559 aaKnown RBP12.28□□□□□ -0.44
RABGAP1-213ENST00000616002 PHF24Q9UPV7 400 aa12.28□□□□□ -0.44
RABGAP1-213ENST00000616002 EPN1Q9Y6I3 576 aaPredicted RBP12.28□□□□□ -0.44
RABGAP1-213ENST00000616002 MYH6P13533 1939 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 CARNS1A5YM72 827 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 SHOX2O60902 331 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 SLC25A27O95847 323 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 CLTBP09497 229 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 TNNT3P45378 269 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 NOP2P46087 812 aaKnown RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 COPB1P53618 953 aaKnown RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 ATP2C1P98194 919 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 CDK17Q00537 523 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 AKAP17AQ02040 695 aaKnown RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 GRIN1Q05586 938 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 KRT31Q15323 416 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 TCP11X2Q5H9J9 407 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 ZNF658Q5TYW1 1059 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 ZNF572Q7Z3I7 529 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 CLEC10AQ8IUN9 316 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 ZNF654Q8IZM8 581 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 OR8K1Q8NGG5 319 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 NUP58Q9BVL2 599 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 IRX2Q9BZI1 471 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 VCPKMTQ9H867 229 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 EPB41L4AQ9HCS5 686 aaPredicted RBP12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 FAN1Q9Y2M0 1017 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 TMX2Q9Y320 296 aa12.27□□□□□ -0.44
RABGAP1-213ENST00000616002 VCANP13611 3396 aa12.27□□□□□ -0.45
RABGAP1-213ENST00000616002 N4BP3O15049 544 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 WDR46O15213 610 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 NDUFA10O95299 355 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PGK1P00558 417 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 CYP2D6P10635 497 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 RAG1P15918 1043 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PRLRP16471 622 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 RXRAP19793 462 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 EEF1GP26641 437 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PPP1R2P41236 205 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PAK1Q13153 545 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 KCTD2Q14681 263 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 SEC23AQ15436 765 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 MEA1Q16626 185 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 SPECC1Q5M775 1068 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 CCDC170Q8IYT3 715 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 LCORLQ8N3X6 602 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 TNFRSF25Q93038 417 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 DYNLL2Q96FJ2 89 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 MMP19Q99542 508 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 CAPN11Q9UMQ6 739 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 KCNJ14Q9UNX9 436 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 MYH8P13535 1937 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 SMCHD1A6NHR9 2005 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 ZNFX1Q9P2E3 1918 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 TMEM265A0A087WTH1 108 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PQBP1O60828 265 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PRPF6O94906 941 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 PGK2P07205 417 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 FGRP09769 529 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 AKR1B1P15121 316 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 ITGB8P26012 769 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 FUT2Q10981 343 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 KCNB1Q14721 858 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 TMEM132BQ14DG7 1078 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 GBP6Q6ZN66 633 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 SIAH1Q8IUQ4 282 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 AMOTL1Q8IY63 956 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 EFCAB13Q8IY85 973 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 AFAP1L1Q8TED9 768 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 COG1Q8WTW3 980 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 SYMPKQ92797 1274 aaKnown RBP12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 CCDC17Q96LX7 622 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 TINF2Q9BSI4 451 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 RSPH14Q9UHP6 348 aa12.26□□□□□ -0.45
RABGAP1-213ENST00000616002 EYSQ5T1H1 3165 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 A0A087X0B3 334 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 A0A1W2PQ45 241 aaPredicted RBP12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 A0A1W2PQY0 241 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 KIAA0355O15063 1070 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 AKR1A1P14550 325 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 KRT9P35527 623 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 FPGSQ05932 587 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 NR5A1Q13285 461 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 FIGNQ5HY92 759 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 PDXDC2PQ6P474 469 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 LRRC31Q6UY01 552 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 RIOX2Q8IUF8 465 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 GRAMD1CQ8IYS0 662 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 OXER1Q8TDS5 423 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 ESR2Q92731 530 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 TSGA10Q9BZW7 698 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 ARMT1Q9H993 441 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 ATP8A2Q9NTI2 1148 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 TMEM39AQ9NV64 488 aa12.25□□□□□ -0.45
RABGAP1-213ENST00000616002 DIS3Q9Y2L1 958 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms