RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 GOLGA8IPA6NC78 632 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 GOLGA8JA6NMD2 632 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 CDC25BP30305 580 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 CDC42EP1Q00587 391 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 SPDYE2Q495Y8 402 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 DPF2Q92785 391 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 ERO1AQ96HE7 468 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 NUDT12Q9BQG2 462 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 TMEM106CQ9BVX2 250 aa10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 POLR3FQ9H1D9 316 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 EPN1Q9Y6I3 576 aaPredicted RBP10.26□□□□□ -0.77
CLTCL1-208ENST00000615606 DISP2A7MBM2 1401 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 GOLGA6CA6NDK9 693 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 GOLGA6BA6NDN3 693 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 GOLGA6DP0CG33 693 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 CASP14P31944 242 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 COASYQ13057 564 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 RHPN2Q8IUC4 686 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 MAP7D3Q8IWC1 876 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 SEPT1Q8WYJ6 367 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 ZKSCAN4Q969J2 545 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 PAIP2Q9BPZ3 127 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 LRRC4BQ9NT99 713 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 GOLGA6AQ9NYA3 693 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 V9GYY5 206 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 SLIT3O75094 1523 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 ESYT2A0FGR8 921 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 STXBP3O00186 592 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 DDNO94850 711 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 EYA4O95677 639 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 LONRF2Q1L5Z9 754 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 NBPF9Q3BBW0 867 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 XKR3Q5GH77 459 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 ARFGAP2Q8N6H7 521 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 RPGRIP1Q96KN7 1286 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 CEP63Q96MT8 703 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 SMARCAD1Q9H4L7 1026 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 CNTNAP5Q8WYK1 1306 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 TLDC2A0PJX2 215 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 MYO1FO00160 1098 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 SLC16A4O15374 487 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 IVLP07476 585 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 GCLCP48506 637 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 BFSP1Q12934 665 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 PPP1R21Q6ZMI0 780 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 NDST4Q9H3R1 872 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 UBE2TQ9NPD8 197 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 CYP2B6P20813 491 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 U2AF2P26368 475 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 ATP5DP30049 168 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 BACE1P56817 501 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 MAPK8IP2Q13387 824 aaPredicted RBP10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 ZNF667Q5HYK9 610 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 HYOU1Q9Y4L1 999 aa10.25□□□□□ -0.77
CLTCL1-208ENST00000615606 TYW5A2RUC4 315 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 KBTBD13C9JR72 458 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 TM4SF1P30408 202 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 ELF1P32519 619 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 EFNA5P52803 228 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 FCGRTP55899 365 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 KYAT1Q16773 422 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 FAM149B1Q96BN6 582 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 GDAQ9Y2T3 454 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 SAR1BQ9Y6B6 198 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 KIF28PB7ZC32 967 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 NR3C1P04150 777 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 OATP04181 439 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 ANXA13P27216 316 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 RNF187Q5TA31 235 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 KLHL7Q8IXQ5 586 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 BEST2Q8NFU1 509 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 URGCPQ8TCY9 931 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 SCFD2Q8WU76 684 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 PSMB7Q99436 277 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 TYW1Q9NV66 732 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 A6NJR5 290 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 LRRN2O75325 713 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 ICAM1P05362 532 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 DACT2Q5SW24 774 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 C15orf52Q6ZUT6 534 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 CYFIP1Q7L576 1253 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 RSAD2Q8WXG1 361 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 ZMYND12Q9H0C1 365 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 SAMSN1Q9NSI8 373 aaKnown RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 PPP2R2CQ9Y2T4 447 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 TTLL3Q9Y4R7 772 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 IFT172Q9UG01 1749 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 DYNC1LI2O43237 492 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 ZBED6P86452 979 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 GABPAQ06546 454 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 SMAP1Q8IYB5 467 aaPredicted RBP10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 SAMD3Q8N6K7 520 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 GRK7Q8WTQ7 553 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 UBE2Q2Q8WVN8 375 aa10.24□□□□□ -0.77
CLTCL1-208ENST00000615606 FHDC1Q9C0D6 1143 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms