RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 SLC17A8Q8NDX2 589 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 SH3RF3Q8TEJ3 882 aaPredicted RBP12.79□□□□□ -0.36
CDH5-208ENST00000614547 CELF1Q92879 486 aaKnown RBP12.79□□□□□ -0.36
CDH5-208ENST00000614547 PBKQ96KB5 322 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 OSBPL7Q9BZF2 842 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 FAM114A2Q9NRY5 505 aa12.79□□□□□ -0.36
CDH5-208ENST00000614547 CNOT8Q9UFF9 292 aaKnown RBP12.79□□□□□ -0.36
CDH5-208ENST00000614547 CCT8L1PA6NM43 557 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 USP17L5A8MUK1 530 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 KIF1CO43896 1103 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 ANP32DO95626 131 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 MXRA7P84157 204 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 SLC29A2Q14542 456 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 NSMFQ6X4W1 530 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 MYCT1Q8N699 235 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 MIEF2Q96C03 454 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 ZBTB10Q96DT7 871 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 ISCUQ9H1K1 167 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 SPATS2LQ9NUQ6 558 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 INTUQ9ULD6 942 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 EEF2P13639 858 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 PMS2P54278 862 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 TAOK1Q7L7X3 1001 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 SYCE1Q8N0S2 351 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 GUF1Q8N442 669 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 IQCDQ96DY2 449 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 NOP53Q9NZM5 478 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 RASSF10A6NK89 507 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 SMIM24O75264 130 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 SUN1O94901 812 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 MYL1P05976 194 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 PLA2G4BP0C869 781 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 TNIP1Q15025 636 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 UAP1Q16222 522 aaPredicted RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 LONRF1Q17RB8 773 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 AP1ARQ63HQ0 302 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 DDX23Q9BUQ8 820 aaKnown RBP12.78□□□□□ -0.36
CDH5-208ENST00000614547 NEUROG2Q9H2A3 272 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 OSGEPQ9NPF4 335 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 HOMER3Q9NSC5 361 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 BARHL2Q9NY43 387 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 KLHL14Q9P2G3 628 aa12.78□□□□□ -0.36
CDH5-208ENST00000614547 CAPRIN2Q6IMN6 1127 aaKnown RBP12.77□□□□□ -0.36
CDH5-208ENST00000614547 KCTD1Q719H9 257 aa12.77□□□□□ -0.36
CDH5-208ENST00000614547 EPS8L3Q8TE67 593 aaKnown RBP12.77□□□□□ -0.36
CDH5-208ENST00000614547 CUL5Q93034 780 aa12.77□□□□□ -0.36
CDH5-208ENST00000614547 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.36
CDH5-208ENST00000614547 TRIM7Q9C029 511 aa12.77□□□□□ -0.36
CDH5-208ENST00000614547 STMN4Q9H169 189 aaPredicted RBP12.77□□□□□ -0.36
CDH5-208ENST00000614547 PLCB1Q9NQ66 1216 aa12.77□□□□□ -0.36
CDH5-208ENST00000614547 WDR91A4D1P6 747 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 POTEFA5A3E0 1075 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDH5-208ENST00000614547 AFPP02771 609 aaKnown RBP12.77□□□□□ -0.37
CDH5-208ENST00000614547 POTEIP0CG38 1075 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 FUT2Q10981 343 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 ITPK1Q13572 414 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 SPRED3Q2MJR0 410 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 POTEGQ6S5H5 508 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 POTEEQ6S8J3 1075 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 C7orf25Q9BPX7 421 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 RIC8AQ9NPQ8 531 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 ATP8A2Q9NTI2 1148 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 CCDC87Q9NVE4 849 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 MTUS1Q9ULD2 1270 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L15C9J2P7 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L13C9JLJ4 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L11C9JVI0 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L18D6R9N7 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L22D6RA61 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L17D6RBQ6 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L19D6RCP7 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L20D6RJB6 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 SLC37A4O43826 429 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 SHBGP04278 402 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 RPS8P62241 208 aaKnown RBP12.77□□□□□ -0.37
CDH5-208ENST00000614547 PLCB3Q01970 1234 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L24Q0WX57 530 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 USP17L6PQ6QN14 398 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 VGLL2Q8N8G2 317 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 RAD54LQ92698 747 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 FAM84BQ96KN1 310 aaPredicted RBP12.77□□□□□ -0.37
CDH5-208ENST00000614547 QTRT2Q9H974 415 aaKnown RBP12.77□□□□□ -0.37
CDH5-208ENST00000614547 GDF3Q9NR23 364 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 SIK3Q9Y2K2 1263 aa12.77□□□□□ -0.37
CDH5-208ENST00000614547 POC1B-GALNT4F8VUJ3 575 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 DDX39AO00148 427 aaKnown RBP12.76□□□□□ -0.37
CDH5-208ENST00000614547 UBOX5O94941 541 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 KRT15P19012 456 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 PREPLQ4J6C6 727 aaPredicted RBP12.76□□□□□ -0.37
CDH5-208ENST00000614547 HS2ST1Q7LGA3 356 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 ETNK1Q9HBU6 452 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 USTQ9Y2C2 406 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 RTCBQ9Y3I0 505 aaKnown RBP12.76□□□□□ -0.37
CDH5-208ENST00000614547 NWD1Q149M9 1564 aa12.76□□□□□ -0.37
CDH5-208ENST00000614547 A0A1W2PQJ5 194 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms