RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 NFKBIEO00221 500 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 PIK3CDO00329 1044 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 NDUFAB1O14561 156 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 EIF3HO15372 352 aaKnown RBP eCLIP18.1■□□□□ 0.49
CNOT3-208ENST00000613073 CHMP2AO43633 222 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 TUBBP07437 444 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 ASNSP08243 561 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 ATP1A2P50993 1020 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 SLC12A3P55017 1021 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 SND1Q7KZF4 910 aaKnown RBP eCLIP18.1■□□□□ 0.49
CNOT3-208ENST00000613073 SAMD7Q7Z3H4 446 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 RGL1Q9NZL6 768 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 CAPN11Q9UMQ6 739 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 GRIN2DO15399 1336 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 EML1O00423 815 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 TBX3O15119 743 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 FECHP22830 423 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 CIITAP33076 1130 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 WDR18Q9BV38 432 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 KCNG1Q9UIX4 513 aa18.1■□□□□ 0.49
CNOT3-208ENST00000613073 ZEB2O60315 1214 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 C2orf54Q08AI8 447 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 PPFIA1Q13136 1202 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 LDHDQ86WU2 507 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 GPIHBP1Q8IV16 184 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 CNPY4Q8N129 248 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 CABS1Q96KC9 395 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 AGBL1Q96MI9 1066 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 DNM3Q9UQ16 869 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 GJA3Q9Y6H8 435 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 TRAF5O00463 557 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 RPA1P27694 616 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 LRRC63Q05C16 580 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 TSR1Q2NL82 804 aaKnown RBP18.09■□□□□ 0.49
CNOT3-208ENST00000613073 TBC1D10BQ4KMP7 808 aaPredicted RBP18.09■□□□□ 0.49
CNOT3-208ENST00000613073 LRRC55Q6ZSA7 311 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 OTUD6BQ8N6M0 293 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 SH2D4AQ9H788 454 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 VAV3Q9UKW4 847 aa18.09■□□□□ 0.49
CNOT3-208ENST00000613073 KIAA0754O94854 1291 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 POLD1P28340 1107 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 VWA3BQ502W6 1294 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 KCTD16Q68DU8 428 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 WDR59Q6PJI9 974 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 TSG101Q99816 390 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 NDST4Q9H3R1 872 aa18.08■□□□□ 0.49
CNOT3-208ENST00000613073 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 SH2D3CQ8N5H7 860 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 CCDC155Q8N6L0 562 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 PRPF38AQ8NAV1 312 aaKnown RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 DNAJC7Q99615 494 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 EIF2AK1Q9BQI3 630 aaKnown RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 BCAS3Q9H6U6 928 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 FEM1BQ9UK73 627 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 PCDHA2Q9Y5H9 948 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 SAR1BQ9Y6B6 198 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 PHF20L1A8MW92 1017 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 CYP3A4P08684 503 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 RASSF7Q02833 373 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 ACTN3Q08043 901 aaPredicted RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 TNIP1Q15025 636 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 PPP2R5AQ15172 486 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 CPXCR1Q8N123 301 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 TTYH3Q9C0H2 523 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 BHMT2Q9H2M3 363 aa18.08■□□□□ 0.48
CNOT3-208ENST00000613073 MRPL11Q9Y3B7 192 aaKnown RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 EPN1Q9Y6I3 576 aaPredicted RBP18.08■□□□□ 0.48
CNOT3-208ENST00000613073 MATR3P43243 847 aaKnown RBP eCLIP18.07■□□□□ 0.48
CNOT3-208ENST00000613073 RNF187Q5TA31 235 aaPredicted RBP18.07■□□□□ 0.48
CNOT3-208ENST00000613073 PIGOQ8TEQ8 1089 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 SCFD1Q8WVM8 642 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 ARL8AQ96BM9 186 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 NDUFA10O95299 355 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 RDXP35241 583 aaKnown RBP18.07■□□□□ 0.48
CNOT3-208ENST00000613073 CASP5P51878 434 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 LRCH2Q5VUJ6 765 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 FAM160B2Q86V87 743 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 MICALL2Q8IY33 904 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 TEPSINQ96N21 525 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 REEP2Q9BRK0 252 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 MMRN2Q9H8L6 949 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 CCPG1Q9ULG6 757 aa18.07■□□□□ 0.48
CNOT3-208ENST00000613073 REXO2Q9Y3B8 237 aaKnown RBP18.07■□□□□ 0.48
CNOT3-208ENST00000613073 RSPH10B2B2RC85 870 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 ZBTB39O15060 712 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 EPHB6O15197 1021 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 FGFR1OPO95684 399 aaKnown RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 RSPH10BP0C881 870 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 TRAF1Q13077 416 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 GIT2Q14161 759 aa18.06■□□□□ 0.48
CNOT3-208ENST00000613073 CCNI2Q6ZMN8 369 aaPredicted RBP18.06■□□□□ 0.48
CNOT3-208ENST00000613073 TPH2Q8IWU9 490 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms