RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 SYDE2Q5VT97 1194 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 CEP85Q6P2H3 762 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NPAS4Q8IUM7 802 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 TUT1Q9H6E5 874 aaKnown RBP8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 AGO3Q9H9G7 860 aaKnown RBP8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 KCNK12Q9HB15 430 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 ZNF287Q9HBT7 754 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PARD6AQ9NPB6 346 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 IL17RBQ9NRM6 502 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SETD4Q9NVD3 440 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 TMEM260Q9NX78 707 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 COL20A1Q9P218 1284 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 HCSTQ9UBK5 93 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 ANGPTL2Q9UKU9 493 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PCDHB12Q9Y5F1 795 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 HCFC2Q9Y5Z7 792 aa8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 FNDC1Q4ZHG4 1894 aaPredicted RBP8.42□□□□□ -1.06
PTCHD3P1-201ENST00000612350 CNOT1A5YKK6 2376 aaKnown RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DENND4AQ7Z401 1863 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NARSO43776 548 aaKnown RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 EIF3JO75822 258 aaKnown RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DCNP07585 359 aaKnown RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NOVP48745 357 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 HSP90AB4PQ58FF6 505 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 FBXO47Q5MNV8 452 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PLPP4Q5VZY2 271 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 KIAA1841Q6NSI8 718 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 KANK3Q6NY19 840 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 FEZF2Q8TBJ5 459 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SYTL5Q8TDW5 730 aaPredicted RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NSUN6Q8TEA1 469 aaKnown RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 EPB41L4AQ9HCS5 686 aaPredicted RBP8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 IL1RAPL2Q9NP60 686 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PNMA2Q9UL42 364 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 LZTS1Q9Y250 596 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 MRVI1Q9Y6F6 885 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 KAT6AQ92794 2004 aa8.41□□□□□ -1.06
PTCHD3P1-201ENST00000612350 WDR19Q8NEZ3 1342 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SPTLC1O15269 473 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 HRO43593 1189 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SORBS3O60504 671 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NMT2O60551 498 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 LGALS2P05162 132 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 STAG3L1P0CL83 205 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 GNAT1P11488 350 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 GLULP15104 373 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PLCB3Q01970 1234 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SP2Q02086 613 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 CCDC96Q2M329 555 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 ZNF528Q3MIS6 628 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SPECC1Q5M775 1068 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 ATAT1Q5SQI0 421 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 PHLDB3Q6NSJ2 640 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 ERC1Q8IUD2 1116 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 C12orf76Q8N812 135 aaPredicted RBP8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DCAF4Q8WV16 495 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 MRPS27Q92552 414 aaKnown RBP8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SPATA33Q96N06 139 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 TCF25Q9BQ70 676 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 MAF1Q9H063 256 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 BOLA2Q9H3K6 86 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 C1orf115Q9H7X2 142 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 TBC1D17Q9HA65 648 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 NGRNQ9NPE2 291 aaKnown RBP8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 DBR1Q9UK59 544 aaKnown RBP8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 USP18Q9UMW8 372 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 STX8Q9UNK0 236 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 MTMR7Q9Y216 660 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 EXOC6BQ9Y2D4 811 aa8.4□□□□□ -1.06
PTCHD3P1-201ENST00000612350 SETXQ7Z333 2677 aaKnown RBP8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LILRB5O75023 590 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CLASP2O75122 1294 aaKnown RBP8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 GGPS1O95749 300 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 NR3C2P08235 984 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 CFHP08603 1231 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RARS2Q5T160 578 aaKnown RBP8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RUFY4Q6ZNE9 571 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 TSHZ1Q6ZSZ6 1077 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 THNSL1Q8IYQ7 743 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 COLGALT1Q8NBJ5 622 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZBTB44Q8NCP5 570 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RHPN1Q8TCX5 695 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 NETO1Q8TDF5 533 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 LMBR1Q8WVP7 490 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 NELL1Q92832 810 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RMDN3Q96TC7 470 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 EPC1Q9H2F5 836 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SIT1Q9Y3P8 196 aa8.39□□□□□ -1.07
PTCHD3P1-201ENST00000612350 FRMPD2Q68DX3 1309 aaPredicted RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 RAB11FIP3O75154 756 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ZIC2O95409 532 aaPredicted RBP8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 SCG2P13521 617 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 ATP5JP18859 108 aa8.38□□□□□ -1.07
PTCHD3P1-201ENST00000612350 EIF2AK2P19525 551 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms