RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CYP3A7P24462 503 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 PPP2R2DQ66LE6 453 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 RPAINQ86UA6 219 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 CCDC60Q8IWA6 550 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-208ENST00000612050 CCDC83Q8IWF9 413 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 FAM20AQ96MK3 541 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 UIMC1Q96RL1 719 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 FAM49AQ9H0Q0 323 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-208ENST00000612050 GABBR1Q9UBS5 961 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 TELO2Q9Y4R8 837 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 PCDHA2Q9Y5H9 948 aa13.91□□□□□ -0.18
CBWD3-208ENST00000612050 IGKV6D-21A0A0A0MT36 114 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 MBLAC1A4D2B0 266 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-208ENST00000612050 GRXCR1A8MXD5 290 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 M0R2N6 131 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 DHX15O43143 795 aaKnown RBP13.9□□□□□ -0.18
CBWD3-208ENST00000612050 TLL1O43897 1013 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 LARGE1O95461 756 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 TDP2O95551 362 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 CCNE2O96020 404 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 MMP1P03956 469 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 TMOD1P28289 359 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 MCM2P49736 904 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 ADAM17P78536 824 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 HIC1Q14526 733 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 PPP4R3AQ6IN85 833 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 HERC6Q8IVU3 1022 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 SLFN12Q8IYM2 578 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 DNAJB3Q8WWF6 145 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 SLC5A5Q92911 643 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 C8orf76Q96K31 380 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 PCYT2Q99447 389 aa13.9□□□□□ -0.18
CBWD3-208ENST00000612050 IFIH1Q9BYX4 1025 aaKnown RBP13.9□□□□□ -0.18
CBWD3-208ENST00000612050 SMIM35A0A1B0GVV1 85 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 ADAMTS3O15072 1205 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 TBX3O15119 743 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 MAGEB2O15479 319 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 FOSL2P15408 326 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 WDR5P61964 334 aaKnown RBP13.9□□□□□ -0.19
CBWD3-208ENST00000612050 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.19
CBWD3-208ENST00000612050 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 FAM26DQ5JW98 314 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 FAM43BQ6ZT52 329 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-208ENST00000612050 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.19
CBWD3-208ENST00000612050 ZNF710Q8N1W2 664 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 DBF4BQ8NFT6 615 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 WNT8BQ93098 351 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 LENG9Q96B70 501 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 MAP7D2Q96T17 732 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 NKX2-4Q9H2Z4 354 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 MAFBQ9Y5Q3 323 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-208ENST00000612050 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.19
CBWD3-208ENST00000612050 RANBP2P49792 3224 aaKnown RBP13.89□□□□□ -0.19
CBWD3-208ENST00000612050 KLRC1P26715 233 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 PBX2P40425 430 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 FOSBP53539 338 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 MTHFD1LQ6UB35 978 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 DIS3L2Q8IYB7 885 aaKnown RBP13.89□□□□□ -0.19
CBWD3-208ENST00000612050 METTL13Q8N6R0 699 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 CDX2Q99626 313 aaPredicted RBP13.89□□□□□ -0.19
CBWD3-208ENST00000612050 CDY2AQ9Y6F7 541 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
CBWD3-208ENST00000612050 GBF1Q92538 1859 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 JAK2O60674 1132 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 PSMD10O75832 226 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 OATP04181 439 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 FDPSP14324 419 aaKnown RBP13.88□□□□□ -0.19
CBWD3-208ENST00000612050 RABGGTBP53611 331 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 NPY5RQ15761 445 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 KRT40Q6A162 431 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 RUFY4Q6ZNE9 571 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 MYOCDQ8IZQ8 938 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 MBOAT7Q96N66 472 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 JPH2Q9BR39 696 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-208ENST00000612050 FTHL17Q9BXU8 183 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 TTYH1Q9H313 450 aaPredicted RBP13.88□□□□□ -0.19
CBWD3-208ENST00000612050 UNC45AQ9H3U1 944 aa13.88□□□□□ -0.19
CBWD3-208ENST00000612050 GHRP10912 638 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 DNM2P50570 870 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 PRKCEQ02156 737 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 TBC1D8BQ0IIM8 1120 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 PAK2Q13177 524 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 NR5A1Q13285 461 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 MARCH8Q5T0T0 291 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 TRAF7Q6Q0C0 670 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 EXOC8Q8IYI6 725 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 TRAPPC12Q8WVT3 735 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 MYLIPQ8WY64 445 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
CBWD3-208ENST00000612050 SCLT1Q96NL6 688 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 GUCD1Q96NT3 240 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 RAD9AQ99638 391 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
CBWD3-208ENST00000612050 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
CBWD3-208ENST00000612050 SEPT9Q9UHD8 586 aaPredicted RBP13.87□□□□□ -0.19
CBWD3-208ENST00000612050 NOL7Q9UMY1 257 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms