RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NOVP48745 357 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 CLK2P49760 499 aaKnown RBP16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 SEC16BQ96JE7 1060 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 TRIM31Q9BZY9 425 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 NYXQ9GZU5 481 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 JMJD4Q9H9V9 463 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 NR2E1Q9Y466 385 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 MYH7BA7E2Y1 1941 aa16.51■□□□□ 0.23
PCDHGB1-202ENST00000611598 POTEFA5A3E0 1075 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 hCG_1984214I3L0E3 225 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 ATP2C2O75185 946 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 LDHCP07864 332 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 POTEIP0CG38 1075 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 SLC16A2P36021 539 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 DHX9Q08211 1270 aaKnown RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 PLCB4Q15147 1175 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 DCAF17Q5H9S7 520 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 HYIQ5T013 277 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 POTEGQ6S5H5 508 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 POTEEQ6S8J3 1075 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 ADGRF4Q8IZF3 695 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 ZNF713Q8N859 430 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 TRIM51Q9BSJ1 452 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 MTMR4Q9NYA4 1195 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 ATAD5Q96QE3 1844 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 GOLGA6L7A0A1B0GV03 622 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 MED24O75448 989 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 IBSPP21815 317 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 COL5A3P25940 1745 aaPredicted RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 HOXD13P35453 343 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 KRT71Q3SY84 523 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 C10orf76Q5T2E6 689 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 DAAM2Q86T65 1068 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 MDM1Q8TC05 714 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 NT5C3AQ9H0P0 336 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 A1CFQ9NQ94 594 aaKnown RBP16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 HAUS2Q9NVX0 235 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 STXBP5LQ9Y2K9 1186 aa16.5■□□□□ 0.23
PCDHGB1-202ENST00000611598 F8VZ95 297 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 CHUKO15111 745 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 RHBDL3P58872 404 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 EDRF1Q3B7T1 1238 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 BCAS3Q9H6U6 928 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 ARMCX3Q9UH62 379 aaPredicted RBP16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 NENFQ9UMX5 172 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 COL16A1Q07092 1604 aaPredicted RBP16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 KDM3AQ9Y4C1 1321 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 GPR75-ASB3A0A0A6YYF3 556 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 DDX3XO00571 662 aaKnown RBP eCLIP16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 AFPP02771 609 aaKnown RBP16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 AKR1B1P15121 316 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 RFC4P35249 363 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 IFI16Q16666 785 aaKnown RBP16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 ASPRV1Q53RT3 343 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 AGBL2Q5U5Z8 902 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 SLFN11Q7Z7L1 901 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 NT5DC3Q86UY8 548 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 RASGEF1CQ8N431 466 aa16.49■□□□□ 0.23
PCDHGB1-202ENST00000611598 CCDC188H7C350 402 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 AKAP3O75969 853 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 COPB2P35606 906 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 PSMC6P62333 389 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 DRP2Q13474 957 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 TCERG1LQ5VWI1 586 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 ADAT2Q7Z6V5 191 aaKnown RBP16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 TATDN2Q93075 761 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 SIX2Q9NPC8 291 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 OSGEPQ9NPF4 335 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 ATP8A1Q9Y2Q0 1164 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 PNMA6FA0A0J9YX94 578 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 FRMD3A2A2Y4 597 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 C5orf60A6NFR6 353 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L15C9J2P7 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L13C9JLJ4 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L11C9JVI0 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L18D6R9N7 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L22D6RA61 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L17D6RBQ6 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L19D6RCP7 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L20D6RJB6 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 MEIS1O00470 390 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 FLOT1O75955 427 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 PAEPP09466 180 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L24Q0WX57 530 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 SF3A3Q12874 501 aaKnown RBP eCLIP16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 MTMR3Q13615 1198 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 CYB5D1Q6P9G0 228 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 USP17L6PQ6QN14 398 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 FAM228AQ86W67 206 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 CACNA2D3Q8IZS8 1091 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 ATP8B4Q8TF62 1192 aa16.48■□□□□ 0.23
PCDHGB1-202ENST00000611598 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms