RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 LY6KQ17RY6 165 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 LRCH2Q5VUJ6 765 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 NPAS4Q8IUM7 802 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
ZNF248-208ENST00000611278 NECTIN4Q96NY8 510 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 SEPT9Q9UHD8 586 aaPredicted RBP9.54□□□□□ -0.88
ZNF248-208ENST00000611278 PPME1Q9Y570 386 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 PCDHA10Q9Y5I2 948 aa9.54□□□□□ -0.88
ZNF248-208ENST00000611278 DNAJC25-GNG10A0A024R161 153 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 TBKBP1A7MCY6 615 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 URODP06132 367 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ZNF286BP0CG31 522 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 JAG1P78504 1218 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 MRPS6P82932 125 aaKnown RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 CEP55Q53EZ4 464 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 PRR16Q569H4 304 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ATAT1Q5SQI0 421 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 CREB3L3Q68CJ9 461 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 STXBP4Q6ZWJ1 553 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ANKS1AQ92625 1134 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 GCNAQ96QF7 691 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 PLVAPQ9BX97 442 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ARIH1Q9Y4X5 557 aaPredicted RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 SGSM2O43147 1006 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ASAP2O43150 1006 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 KIF20AO95235 890 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ATP2B1P20020 1258 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 MCTP1Q6DN14 999 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 PHKBQ93100 1093 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 GPR20Q99678 358 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 COLEC11Q9BWP8 271 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 PDGFCQ9NRA1 345 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 DDX41Q9UJV9 622 aaKnown RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 NCAM2O15394 837 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 GAS2O43903 313 aaKnown RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 B4GALT4O60513 344 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 MARCKSP29966 332 aaPredicted RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 DMTNQ08495 405 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 VSIG10LQ86VR7 867 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ZSCAN31Q96LW9 406 aaPredicted RBP9.53□□□□□ -0.88
ZNF248-208ENST00000611278 ESYT1Q9BSJ8 1104 aa9.53□□□□□ -0.88
ZNF248-208ENST00000611278 IGKV6D-41A0A0C4DH26 115 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 TRIM43BA6NCK2 446 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 TRAPPC3O43617 180 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 MTHFRP42898 656 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 BMP2KLQ5H9B9 411 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 RNF214Q8ND24 703 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 TRIM43Q96BQ3 446 aaPredicted RBP9.52□□□□□ -0.88
ZNF248-208ENST00000611278 NACC1Q96RE7 527 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 SQORQ9Y6N5 450 aa9.52□□□□□ -0.88
ZNF248-208ENST00000611278 STXBP3O00186 592 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 PGM5Q15124 567 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 PSPC1Q8WXF1 523 aaKnown RBP9.52□□□□□ -0.89
ZNF248-208ENST00000611278 CASP10Q92851 521 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 NGRNQ9NPE2 291 aaKnown RBP9.52□□□□□ -0.89
ZNF248-208ENST00000611278 SETD4Q9NVD3 440 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 LIG1P18858 919 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 DBF4BQ8NFT6 615 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 A0A0G2JMZ2 1700 aa9.52□□□□□ -0.89
ZNF248-208ENST00000611278 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SSBP05455 408 aaKnown RBP eCLIP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 UBE3AQ05086 875 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 ELAVL2Q12926 359 aaKnown RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SF3A1Q15459 793 aaKnown RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SHROOM1Q2M3G4 852 aaPredicted RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PAN2Q504Q3 1202 aaKnown RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PDXDC1Q6P996 788 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 TBC1D10CQ8IV04 446 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 DEPTORQ8TB45 409 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 NEK9Q8TD19 979 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 BRF1Q92994 677 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 ARHGEF35A5YM69 484 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 EPB41L2O43491 1005 aaKnown RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SMTNP53814 917 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PTCRAQ6ISU1 281 aaPredicted RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 TSHZ1Q6ZSZ6 1077 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SIRT2Q8IXJ6 389 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 LRRC43Q8N309 656 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 CXXC1Q9P0U4 656 aaPredicted RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 CD207Q9UJ71 328 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 INPP5FQ9Y2H2 1132 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 ABCD1P33897 745 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PLA2G5P39877 138 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 ZNF746Q6NUN9 644 aaPredicted RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 POTEEQ6S8J3 1075 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SH3RF1Q7Z6J0 888 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 USP37Q86T82 979 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 YAF2Q8IY57 180 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 OTUD7AQ8TE49 926 aaPredicted RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 BICD1Q96G01 975 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 MXRA8Q9BRK3 442 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PBX4Q9BYU1 374 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 UBA1P22314 1058 aaKnown RBP9.51□□□□□ -0.89
ZNF248-208ENST00000611278 XKR9Q5GH70 373 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 XKR3Q5GH77 459 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 GJD3Q8N144 294 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 PDCL2Q8N4E4 241 aa9.51□□□□□ -0.89
ZNF248-208ENST00000611278 SPG21Q9NZD8 308 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms