RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 DYMQ7RTS9 669 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 TRIM50Q86XT4 487 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 C4orf19Q8IY42 314 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 PIAS4Q8N2W9 510 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-221ENST00000608903 NEK9Q8TD19 979 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 SEPT1Q8WYJ6 367 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 SPATA33Q96N06 139 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 ZSWIM4Q9H7M6 989 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 MAFBQ9Y5Q3 323 aaPredicted RBP12.9□□□□□ -0.34
CTCFL-221ENST00000608903 MYH9P35579 1960 aaKnown RBP12.9□□□□□ -0.34
CTCFL-221ENST00000608903 CASP8AP2Q9UKL3 1982 aa12.9□□□□□ -0.34
CTCFL-221ENST00000608903 SSBP05455 408 aaKnown RBP eCLIP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 CYBAP13498 195 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 MUTP22033 750 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 CACNB1Q02641 598 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 PLA2G4FQ68DD2 849 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 MIS18BP1Q6P0N0 1132 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 ANO5Q75V66 913 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 AFG1LQ8WV93 481 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 NACC1Q96RE7 527 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 IGSF9BQ9UPX0 1349 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 LGR5O75473 907 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 GH1P01241 217 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 NPEPPSP55786 919 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 RAD51AP2Q09MP3 1159 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 IRF5Q13568 498 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 UTP14CQ5TAP6 766 aaKnown RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 RINT1Q6NUQ1 792 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 C11orf57Q6ZUT1 292 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 C1orf186Q6ZWK4 172 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 GPBP1Q86WP2 473 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 DDX12PQ92771 950 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 HPS3Q969F9 1004 aa12.89□□□□□ -0.35
CTCFL-221ENST00000608903 EMID1Q96A84 441 aaPredicted RBP12.89□□□□□ -0.35
CTCFL-221ENST00000608903 BACH1O14867 736 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
CTCFL-221ENST00000608903 YWHABP31946 246 aaKnown RBP12.88□□□□□ -0.35
CTCFL-221ENST00000608903 LAMC2Q13753 1193 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 MORC3Q14149 939 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 DPCR1Q3MIW9 517 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 KMT5BQ4FZB7 885 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 CNNM4Q6P4Q7 775 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 ERO1AQ96HE7 468 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 ZNF302Q9NR11 478 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 RSPH10B2B2RC85 870 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 DYNC1LI2O43237 492 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-221ENST00000608903 RSPH10BP0C881 870 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 CCND3P30281 292 aaPredicted RBP12.88□□□□□ -0.35
CTCFL-221ENST00000608903 RARRES1P49788 294 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 NLRP12P59046 1061 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 PRKCEQ02156 737 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 GIT2Q14161 759 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 AFAP1L1Q8TED9 768 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 CEP89Q96ST8 783 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 TCEAL9Q9UHQ7 104 aa12.88□□□□□ -0.35
CTCFL-221ENST00000608903 DBR1Q9UK59 544 aaKnown RBP12.88□□□□□ -0.35
CTCFL-221ENST00000608903 ADCY3O60266 1144 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
CTCFL-221ENST00000608903 STAT5BP51692 787 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 EHHADHQ08426 723 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 MFSD14CQ5VZR4 134 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 SASS6Q6UVJ0 657 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 SMYD4Q8IYR2 804 aaPredicted RBP12.87□□□□□ -0.35
CTCFL-221ENST00000608903 KCTD17Q8N5Z5 321 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 OR6J1Q8NGC5 347 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 PPTC7Q8NI37 304 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 ANP32BQ92688 251 aaKnown RBP12.87□□□□□ -0.35
CTCFL-221ENST00000608903 DNAJC25Q9H1X3 360 aa12.87□□□□□ -0.35
CTCFL-221ENST00000608903 CEP350Q5VT06 3117 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 CCDC192P0DO97 292 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 HOXD8P13378 290 aaPredicted RBP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 HOXD10P28358 340 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 ASIC1P78348 528 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 ANO6Q4KMQ2 910 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 GLIS3Q8NEA6 775 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 ATP6V0A1Q93050 837 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 GSDMAQ96QA5 445 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 MED15Q96RN5 788 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 C16orf70Q9BSU1 422 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 FGFBP2Q9BYJ0 223 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 HOOK1Q9UJC3 728 aaKnown RBP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 FAM184BQ9ULE4 1060 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 GDAQ9Y2T3 454 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 ARID2Q68CP9 1835 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 NOP56O00567 594 aaKnown RBP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
CTCFL-221ENST00000608903 SMC2O95347 1197 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 LGALS2P05162 132 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 MMP3P08254 477 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 MARK3P27448 753 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 AMPD3Q01432 767 aa12.86□□□□□ -0.35
CTCFL-221ENST00000608903 MAPK7Q13164 816 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms