RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
CTCFL-219ENST00000608720 ZSCAN5CA6NGD5 496 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L15C9J2P7 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L13C9JLJ4 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L11C9JVI0 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L18D6R9N7 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L22D6RA61 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L17D6RBQ6 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L19D6RCP7 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L20D6RJB6 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 CALUO43852 315 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 ADRA2BP18089 450 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 SATB1Q01826 763 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L24Q0WX57 530 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP17L6PQ6QN14 398 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 ZNF571Q7Z3V5 609 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 YTHDF3Q7Z739 585 aaKnown RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 PIK3R5Q8WYR1 880 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 USP40Q9NVE5 1235 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 KCNK3O14649 394 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 RAD51CO43502 376 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 KIF4AO95239 1232 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 MYCNP04198 464 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 HLA-DOAP06340 250 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 UCHL3P15374 230 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 HOXA10P31260 410 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 HSPA9P38646 679 aaKnown RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 FNTAP49354 379 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 GUCY2FP51841 1108 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 AP3B2Q13367 1082 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 GIT2Q14161 759 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 EXOC3L4Q17RC7 722 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 ACTRT1Q8TDG2 376 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 CCDC17Q96LX7 622 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 MXD3Q9BW11 206 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 ISCUQ9H1K1 167 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 TAF1DQ9H5J8 278 aaPredicted RBP16.03■□□□□ 0.16
CTCFL-219ENST00000608720 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 PCDHA1Q9Y5I3 950 aa16.03■□□□□ 0.16
CTCFL-219ENST00000608720 ATP8B3O60423 1300 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 TMCO5BA8MYB1 307 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 PDXKO00764 312 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 TBX3O15119 743 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 ZEB2O60315 1214 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 SERPINB2P05120 415 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 ACTN1P12814 892 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 SLC9A1P19634 815 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 STAT3P40763 770 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 PRKCIP41743 596 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.16
CTCFL-219ENST00000608720 CUL1Q13616 776 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 FBXW10Q5XX13 1052 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 KCTD16Q68DU8 428 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 TTC19Q6DKK2 380 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-219ENST00000608720 KLHL7Q8IXQ5 586 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 SH2D3CQ8N5H7 860 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-219ENST00000608720 SCFD2Q8WU76 684 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 LMBR1Q8WVP7 490 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 COA1Q9GZY4 146 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 METTL14Q9HCE5 456 aaKnown RBP16.02■□□□□ 0.16
CTCFL-219ENST00000608720 NAGPAQ9UK23 515 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 FBXL5Q9UKA1 691 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 MYH10P35580 1976 aa16.02■□□□□ 0.16
CTCFL-219ENST00000608720 POTEFA5A3E0 1075 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.15
CTCFL-219ENST00000608720 FLOT1O75955 427 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 POTEIP0CG38 1075 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 XRCC5P13010 732 aaKnown RBP16.02■□□□□ 0.15
CTCFL-219ENST00000608720 PON1P27169 355 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 PDCLQ13371 301 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 POTEGQ6S5H5 508 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 POTEEQ6S8J3 1075 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 EPM2AIP1Q7L775 607 aaPredicted RBP16.02■□□□□ 0.15
CTCFL-219ENST00000608720 CATSPER3Q86XQ3 398 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 CALR3Q96L12 384 aaKnown RBP16.02■□□□□ 0.15
CTCFL-219ENST00000608720 CRAMP1Q96RY5 1269 aa16.02■□□□□ 0.15
CTCFL-219ENST00000608720 NDUFAB1O14561 156 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 CHUKO15111 745 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 RPL13P26373 211 aaKnown RBP16.01■□□□□ 0.15
CTCFL-219ENST00000608720 RPA1P27694 616 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 NEDD9Q14511 834 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 ALKBH5Q6P6C2 394 aaKnown RBP16.01■□□□□ 0.15
CTCFL-219ENST00000608720 LRIG3Q6UXM1 1119 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 ATP6V1G3Q96LB4 118 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 UIMC1Q96RL1 719 aa16.01■□□□□ 0.15
CTCFL-219ENST00000608720 F8W031 263 aaPredicted RBP16■□□□□ 0.15
CTCFL-219ENST00000608720 CEP104O60308 925 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 NR1D1P20393 614 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 ATP1A2P50993 1020 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 CASP5P51878 434 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 ARHGAP4P98171 946 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 PLCB4Q15147 1175 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 Q4G0T1 1027 aa16■□□□□ 0.15
CTCFL-219ENST00000608720 ETNPPLQ8TBG4 499 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms