RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PCYT2Q99447 389 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 RIC8AQ9NPQ8 531 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
CTSA-216ENST00000607212 KIAA1671Q9BY89 1806 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 NFASCO94856 1347 aa16.95■□□□□ 0.3
CTSA-216ENST00000607212 SMCO2A6NFE2 343 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 PRR33A8MZF0 331 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 DGKIO75912 1065 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 SCG2P13521 617 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 KRT76Q01546 638 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 HYAL1Q12794 435 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 NECTIN1Q15223 517 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 TMEM266Q2M3C6 531 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 CEP55Q53EZ4 464 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 PPP1R18Q6NYC8 613 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 APOA5Q6Q788 366 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 SGMS1Q86VZ5 419 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 CKAP2LQ8IYA6 745 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 CMTR2Q8IYT2 770 aaKnown RBP16.94■□□□□ 0.3
CTSA-216ENST00000607212 PLVAPQ9BX97 442 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 CELF4Q9BZC1 486 aaKnown RBP16.94■□□□□ 0.3
CTSA-216ENST00000607212 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
CTSA-216ENST00000607212 AGO4Q9HCK5 861 aaKnown RBP16.94■□□□□ 0.3
CTSA-216ENST00000607212 TMEM260Q9NX78 707 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 PRKAG3Q9UGI9 489 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 PADI3Q9ULW8 664 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 PCDHA2Q9Y5H9 948 aa16.94■□□□□ 0.3
CTSA-216ENST00000607212 V9GY48 417 aaPredicted RBP16.94■□□□□ 0.3
CTSA-216ENST00000607212 PPFIA3O75145 1194 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 MMP1P03956 469 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 GTF2F1P35269 517 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTSA-216ENST00000607212 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 MTHFD1LQ6UB35 978 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 PLPPR4Q7Z2D5 763 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 TRMT1LQ7Z2T5 733 aaKnown RBP16.93■□□□□ 0.3
CTSA-216ENST00000607212 ADHFE1Q8IWW8 467 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 LINC01599Q8WXQ3 324 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 CLP1Q92989 425 aaKnown RBP16.93■□□□□ 0.3
CTSA-216ENST00000607212 ZNF689Q96CS4 500 aaPredicted RBP16.93■□□□□ 0.3
CTSA-216ENST00000607212 PPP1R16BQ96T49 567 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 POP1Q99575 1024 aaKnown RBP16.93■□□□□ 0.3
CTSA-216ENST00000607212 CD207Q9UJ71 328 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 PCDHB7Q9Y5E2 793 aa16.93■□□□□ 0.3
CTSA-216ENST00000607212 EVPLQ92817 2033 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 KLF18A0A0U1RQI7 1052 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 SMIM35A0A1B0GVV1 85 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 DENND3A2RUS2 1198 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 ZP2Q05996 745 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
CTSA-216ENST00000607212 AP3B2Q13367 1082 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 PDXDC2PQ6P474 469 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 PLA2G4DQ86XP0 818 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 NME8Q8N427 588 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 MICAL1Q8TDZ2 1067 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 GLT8D2Q9H1C3 349 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 RC3H2Q9HBD1 1191 aaKnown RBP16.92■□□□□ 0.3
CTSA-216ENST00000607212 ZNF302Q9NR11 478 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 PLAGL2Q9UPG8 496 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 ARIH1Q9Y4X5 557 aaPredicted RBP16.92■□□□□ 0.3
CTSA-216ENST00000607212 SQORQ9Y6N5 450 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 IGSF9BQ9UPX0 1349 aa16.92■□□□□ 0.3
CTSA-216ENST00000607212 MYH9P35579 1960 aaKnown RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 hCG_1984214I3L0E3 225 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 STXBP3O00186 592 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 LINC01565O15544 149 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 MBTPS2O43462 519 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 HBP1O60381 514 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 KLRC1P26715 233 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 GATMP50440 423 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 SLC26A2P50443 739 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 DLX2Q07687 328 aaPredicted RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 ODR4Q5SWX8 454 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 TYW1BQ6NUM6 668 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 MIS18BP1Q6P0N0 1132 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 DHX32Q7L7V1 743 aaKnown RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 RBM23Q86U06 439 aaKnown RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 RTN4RL1Q86UN2 441 aaPredicted RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 ZNF713Q8N859 430 aaPredicted RBP16.91■□□□□ 0.3
CTSA-216ENST00000607212 KLHL23Q8NBE8 558 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 POF1BQ8WVV4 589 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 P2RX5Q93086 422 aa16.91■□□□□ 0.3
CTSA-216ENST00000607212 ITGB1P05556 798 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 LINC00271P0C7V0 271 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 LTBRP36941 435 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 SMAD4Q13485 552 aaKnown RBP16.9■□□□□ 0.3
CTSA-216ENST00000607212 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 METTL13Q8N6R0 699 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 AAASQ9NRG9 546 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 RNF216Q9NWF9 866 aaPredicted RBP16.9■□□□□ 0.3
CTSA-216ENST00000607212 BARHL2Q9NY43 387 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 BRPF3Q9ULD4 1205 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
CTSA-216ENST00000607212 TBKBP1A7MCY6 615 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 TBX10O75333 385 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 SREBF1P36956 1147 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 NRIP1P48552 1158 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 SARSP49591 514 aaKnown RBP16.89■□□□□ 0.29
CTSA-216ENST00000607212 KRT32Q14532 448 aa16.89■□□□□ 0.29
CTSA-216ENST00000607212 COL19A1Q14993 1142 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms