RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 AP3B2Q13367 1082 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 BTG3Q14201 252 aaPredicted RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 PFKFB3Q16875 520 aaPredicted RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 PTCRAQ6ISU1 281 aaPredicted RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 EP400NLQ6ZTU2 488 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 PLA2G4DQ86XP0 818 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 FAM178BQ8IXR5 827 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 CRIPAKQ8N1N5 446 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 ZNF713Q8N859 430 aaPredicted RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 NEK9Q8TD19 979 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 KCNB2Q92953 911 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 TNPO1Q92973 898 aaKnown RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 CELF4Q9BZC1 486 aaKnown RBP24.88■■□□□ 1.57
TMEM248-207ENST00000607045 GLT8D2Q9H1C3 349 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 TRPV2Q9Y5S1 764 aa24.88■■□□□ 1.57
TMEM248-207ENST00000607045 GRXCR2A6NFK2 248 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 PPFIA3O75145 1194 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 RB1P06400 928 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 HMGB1P09429 215 aaKnown RBP24.87■■□□□ 1.57
TMEM248-207ENST00000607045 METAP2P50579 478 aaKnown RBP eCLIP24.87■■□□□ 1.57
TMEM248-207ENST00000607045 TIGD5Q53EQ6 642 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 CRYGNQ8WXF5 182 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 CLP1Q92989 425 aaKnown RBP24.87■■□□□ 1.57
TMEM248-207ENST00000607045 BRF1Q92994 677 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 LRFN3Q9BTN0 628 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 NSUN3Q9H649 340 aaKnown RBP24.87■■□□□ 1.57
TMEM248-207ENST00000607045 CDHR5Q9HBB8 845 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 SQORQ9Y6N5 450 aa24.87■■□□□ 1.57
TMEM248-207ENST00000607045 ADGRA3Q8IWK6 1321 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 TTC3P53804 2025 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 IGLV3-22A0A075B6J6 115 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 SMIM35A0A1B0GVV1 85 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 BACH1O14867 736 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 ATP4AP20648 1035 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 PKN1Q16512 942 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 TMEM266Q2M3C6 531 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 SWSAP1Q6NVH7 229 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 NIPA1Q7RTP0 329 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 CCDC60Q8IWA6 550 aaPredicted RBP24.86■■□□□ 1.57
TMEM248-207ENST00000607045 NME8Q8N427 588 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 JAKMIP1Q96N16 626 aaKnown RBP24.86■■□□□ 1.57
TMEM248-207ENST00000607045 TMX1Q9H3N1 280 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 SNX14Q9Y5W7 946 aa24.86■■□□□ 1.57
TMEM248-207ENST00000607045 RPLP2P05387 115 aaKnown RBP24.85■■□□□ 1.57
TMEM248-207ENST00000607045 CYP3A4P08684 503 aa24.85■■□□□ 1.57
TMEM248-207ENST00000607045 SCG2P13521 617 aa24.85■■□□□ 1.57
TMEM248-207ENST00000607045 RCAN1P53805 252 aa24.85■■□□□ 1.57
TMEM248-207ENST00000607045 KIAA0319LQ8IZA0 1049 aa24.85■■□□□ 1.57
TMEM248-207ENST00000607045 PABPC5Q96DU9 382 aaKnown RBP24.85■■□□□ 1.57
TMEM248-207ENST00000607045 ALG13Q9NP73 1137 aaKnown RBP24.85■■□□□ 1.57
TMEM248-207ENST00000607045 IGSF9BQ9UPX0 1349 aa24.85■■□□□ 1.57
TMEM248-207ENST00000607045 M0QZ92 97 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 HBP1O60381 514 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 CSPG5O95196 566 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 LTBRP36941 435 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 KRT76Q01546 638 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 COL19A1Q14993 1142 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 GJD3Q8N144 294 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 ATP8B4Q8TF62 1192 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 PHKBQ93100 1093 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 C11orf84Q9BUA3 381 aaPredicted RBP24.84■■□□□ 1.57
TMEM248-207ENST00000607045 FTHL17Q9BXU8 183 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 ZMYND12Q9H0C1 365 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 GINS2Q9Y248 185 aa24.84■■□□□ 1.57
TMEM248-207ENST00000607045 MRPL42Q9Y6G3 142 aaKnown RBP24.84■■□□□ 1.57
TMEM248-207ENST00000607045 CCDC196A0A1B0GTZ2 297 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 IPO5O00410 1097 aaKnown RBP24.83■■□□□ 1.57
TMEM248-207ENST00000607045 PRPF3O43395 683 aaKnown RBP24.83■■□□□ 1.57
TMEM248-207ENST00000607045 HSPA4P34932 840 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 GATMP50440 423 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 SLC26A2P50443 739 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 NFX1Q12986 1120 aaKnown RBP24.83■■□□□ 1.57
TMEM248-207ENST00000607045 PAK2Q13177 524 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 CAMK1Q14012 370 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 PDXDC2PQ6P474 469 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 TRMT1LQ7Z2T5 733 aaKnown RBP24.83■■□□□ 1.57
TMEM248-207ENST00000607045 C11orf16Q9NQ32 467 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 ZNF302Q9NR11 478 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 CLDND1Q9NY35 253 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 PLAGL2Q9UPG8 496 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 TRIOO75962 3097 aa24.83■■□□□ 1.57
TMEM248-207ENST00000607045 KDM3AQ9Y4C1 1321 aa24.83■■□□□ 1.56
TMEM248-207ENST00000607045 COL4A6Q14031 1691 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 ZBTB42B2RXF5 422 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 PI4K2BG5E9Z4 385 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 IBSPP21815 317 aaPredicted RBP24.82■■□□□ 1.56
TMEM248-207ENST00000607045 GTF2F1P35269 517 aaKnown RBP eCLIP24.82■■□□□ 1.561e-7■■■■■ 30.9
TMEM248-207ENST00000607045 PAN2Q504Q3 1202 aaKnown RBP24.82■■□□□ 1.56
TMEM248-207ENST00000607045 FAM160B1Q5W0V3 765 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 RASGRP4Q8TDF6 673 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 ZNF577Q9BSK1 485 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 C6orf50Q9HD87 102 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 NOC2LQ9Y3T9 749 aaKnown RBP24.82■■□□□ 1.56
TMEM248-207ENST00000607045 RWDD3Q9Y3V2 267 aa24.82■■□□□ 1.56
TMEM248-207ENST00000607045 FAM86C2PA6NEL3 165 aa24.81■■□□□ 1.56
TMEM248-207ENST00000607045 MGEA5O60502 916 aa24.81■■□□□ 1.56
TMEM248-207ENST00000607045 DLX2Q07687 328 aaPredicted RBP24.81■■□□□ 1.56
TMEM248-207ENST00000607045 HYAL1Q12794 435 aa24.81■■□□□ 1.56
TMEM248-207ENST00000607045 NTRK3Q16288 839 aa24.81■■□□□ 1.56
TMEM248-207ENST00000607045 MIS18BP1Q6P0N0 1132 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms